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The map label for this gene is ygdI [H]

Identifier: 238896281

GI number: 238896281

Start: 4264324

End: 4264554

Strand: Reverse

Name: ygdI [H]

Synonym: KP1_4440

Alternate gene names: 238896281

Gene position: 4264554-4264324 (Counterclockwise)

Preceding gene: 238896284

Following gene: 238896280

Centisome position: 81.25

GC content: 49.35

Gene sequence:

>231_bases
ATGAAAATGACTAAGGCCGCTGCGATTATCTCTGCCTGTATGCTGACTTTAGGCCTGAGCGCCTGTTCCTCTAACTATGT
GATGCATACCAACGATGGGCGGACCATCGTTACCGACGGGAAACCGCAAACCGATAATGACACTGGCATGATCTCGTATA
AAGACGCGTGGGGCAACAAACAGCAGATCAATCGTTCTGACGTGAAACAACTGGGTGAACTGGACGAGTAA

Upstream 100 bases:

>100_bases
ACGTCGGTCAAAGAGGGTTATGCTGAAAAGTGTTGGGTTTGTGTTTTAACCTATTACTTAACGAGTTACGAATAGTATAA
ATAGCCGTAAGGAGAGAAGA

Downstream 100 bases:

>100_bases
GGCAGTAAAAAGGCAAAAAAAAGCACCGCGCGTTGCGGTGCTACATTAAATCACTATGGACAGACAGGGTAAATGTACAG
GAAGTGAAAAGGGGTAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MKMTKAAAIISACMLTLGLSACSSNYVMHTNDGRTIVTDGKPQTDNDTGMISYKDAWGNKQQINRSDVKQLGELDE

Sequences:

>Translated_76_residues
MKMTKAAAIISACMLTLGLSACSSNYVMHTNDGRTIVTDGKPQTDNDTGMISYKDAWGNKQQINRSDVKQLGELDE
>Mature_76_residues
MKMTKAAAIISACMLTLGLSACSSNYVMHTNDGRTIVTDGKPQTDNDTGMISYKDAWGNKQQINRSDVKQLGELDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygdR [H]

Homologues:

Organism=Escherichia coli, GI87082162, Length=75, Percent_Identity=84, Blast_Score=129, Evalue=3e-32,
Organism=Escherichia coli, GI1789198, Length=71, Percent_Identity=59.1549295774648, Blast_Score=88, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010305 [H]

Pfam domain/function: PF06004 DUF903 [H]

EC number: NA

Molecular weight: Translated: 8283; Mature: 8283

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTKAAAIISACMLTLGLSACSSNYVMHTNDGRTIVTDGKPQTDNDTGMISYKDAWGNK
CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCEEEECCCCCCC
QQINRSDVKQLGELDE
CCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKMTKAAAIISACMLTLGLSACSSNYVMHTNDGRTIVTDGKPQTDNDTGMISYKDAWGNK
CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCEEEECCCCCCC
QQINRSDVKQLGELDE
CCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]