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The map label for this gene is pad1 [H]

Identifier: 238896216

GI number: 238896216

Start: 4190702

End: 4191295

Strand: Reverse

Name: pad1 [H]

Synonym: KP1_4368

Alternate gene names: 238896216

Gene position: 4191295-4190702 (Counterclockwise)

Preceding gene: 238896218

Following gene: 238896215

Centisome position: 79.86

GC content: 60.61

Gene sequence:

>594_bases
ATGAAACTGATTATTGGGATGACGGGGGCCACCGGGGCACCGCTTGGGGTGGCATTGCTGCAGGCGCTGCGCGATATGCC
GGAGGTGGAAACCCATCTGGTGATGTCGAAATGGGCCAAAACCACCATCGAGCTGGAAACGCCCTGGACGGCGCGCGAAG
TAGCCGCGCTGGCGGACTTTTCCCACAGCCCGGCAGACCAGGCCGCCACCATCTCATCCGGTTCATTTCGTACCGACGGC
ATGATCGTTATTCCCTGCAGTATGAAAACGCTTGCAGGCATTCGCGCGGGTTATGCCGAAGGGCTGGTGGGCCGCGCGGC
GGACGTGGTGCTCAAAGAGGGGCGCAAGCTGGTGTTGGTCCCGCGGGAAATGCCGCTCAGCACGATCCATCTGGAGAACA
TGCTGGCGCTGTCCCGCATGGGCGTGGCGATGGTCCCGCCGATGCCAGCTTACTACAACCACCCGGAGACGGTTGACGAT
ATCACCAATCATATCGTCACCCGGGTGCTGGATCAGTTTGGCCTCGACTATCACAAAGCGCGCCGCTGGAACGGCTTGCG
CACGGCAGAACAATTTGCACAGGAGATCGAATAA

Upstream 100 bases:

>100_bases
ATTAAAAATGCGCACGTATACGAACGATCTTGCCAATAAGAGCTGGAGGGGGTAGTTTAAATATAAAGTTCGTACACGAA
CAAAAGTAATGAGGTCTGGA

Downstream 100 bases:

>100_bases
TGGCTTTTGATGATTTGCGCAGCTTTTTGCAGGCGCTGGATGACCAGGGACAACTGCTGAAAATCAGTGAAGAGGTGAAC
GCTGAGCCCGATCTGGCGGC

Product: putative flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKLIIGMTGATGAPLGVALLQALRDMPEVETHLVMSKWAKTTIELETPWTAREVAALADFSHSPADQAATISSGSFRTDG
MIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAYYNHPETVDD
ITNHIVTRVLDQFGLDYHKARRWNGLRTAEQFAQEIE

Sequences:

>Translated_197_residues
MKLIIGMTGATGAPLGVALLQALRDMPEVETHLVMSKWAKTTIELETPWTAREVAALADFSHSPADQAATISSGSFRTDG
MIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAYYNHPETVDD
ITNHIVTRVLDQFGLDYHKARRWNGLRTAEQFAQEIE
>Mature_197_residues
MKLIIGMTGATGAPLGVALLQALRDMPEVETHLVMSKWAKTTIELETPWTAREVAALADFSHSPADQAATISSGSFRTDG
MIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAYYNHPETVDD
ITNHIVTRVLDQFGLDYHKARRWNGLRTAEQFAQEIE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=52.6881720430108, Blast_Score=201, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=52.9411764705882, Blast_Score=209, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21567; Mature: 21567

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIIGMTGATGAPLGVALLQALRDMPEVETHLVMSKWAKTTIELETPWTAREVAALADF
CEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHC
SHSPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLV
CCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAMVPPMPAYYNHPETVDDITNHIVTRVLDQFGLDYHKA
CCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
RRWNGLRTAEQFAQEIE
HHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKLIIGMTGATGAPLGVALLQALRDMPEVETHLVMSKWAKTTIELETPWTAREVAALADF
CEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHC
SHSPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLV
CCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAMVPPMPAYYNHPETVDDITNHIVTRVLDQFGLDYHKA
CCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
RRWNGLRTAEQFAQEIE
HHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]