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The map label for this gene is ygbA [H]

Identifier: 238896202

GI number: 238896202

Start: 4174940

End: 4175335

Strand: Reverse

Name: ygbA [H]

Synonym: KP1_4351

Alternate gene names: 238896202

Gene position: 4175335-4174940 (Counterclockwise)

Preceding gene: 238896203

Following gene: 238896192

Centisome position: 79.55

GC content: 57.58

Gene sequence:

>396_bases
ATGGATATTAAGGTGTATGATAAATGCATCTTAAAAAAGACGAAAGGCGGGGAGATGGGGAAGCGTATCGAACGGGAAAA
AATGACGATTCAGCGGATGATTGCCCTCTACCAGCGGCGCTGTCCCGAGGCGCAGGCCGATAATGCGCACTATCAGGCGC
TGAACGCCTACGCTGACATGCGCCTTGATAAGTGCGTGTTTGGCGAGAACAAACCGGCCTGCAAGCAGTGTCCGGTGCAC
TGCTACCAGCCGGCGAAGCGCGAGGAGATGAAGCAGATTATGCGCTGGGCCGGGCCGCGGATGCTCTGGCGCCACCCGAT
CCTCACTGTTCGCCATCTGCTGGACGACAGGCGCCCGGTGCCGCCGCTGCCGGAAAAATATCGACCGAAAAAGTAG

Upstream 100 bases:

>100_bases
CGTTTTTATCCGGGATTTCTATGCCTACAGCCATTTCGGGGTTCTGTCCGGGGCAGCCCTGCAGTTGATTCAGCATCTGA
AGCAGTGAGTCTGGTCGGGT

Downstream 100 bases:

>100_bases
CGGCTTTCCCTGGTCAGCGCTGCGCAGCCGGGCGACAAGTCGTGCTCTTGTAGCCCCGGCAAGGCGTTAGCCGCCACCGG
GGATAATTGCTGAAGTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MDIKVYDKCILKKTKGGEMGKRIEREKMTIQRMIALYQRRCPEAQADNAHYQALNAYADMRLDKCVFGENKPACKQCPVH
CYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLLDDRRPVPPLPEKYRPKK

Sequences:

>Translated_131_residues
MDIKVYDKCILKKTKGGEMGKRIEREKMTIQRMIALYQRRCPEAQADNAHYQALNAYADMRLDKCVFGENKPACKQCPVH
CYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLLDDRRPVPPLPEKYRPKK
>Mature_131_residues
MDIKVYDKCILKKTKGGEMGKRIEREKMTIQRMIALYQRRCPEAQADNAHYQALNAYADMRLDKCVFGENKPACKQCPVH
CYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLLDDRRPVPPLPEKYRPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=112, Percent_Identity=81.25, Blast_Score=194, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 15595; Mature: 15595

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKVYDKCILKKTKGGEMGKRIEREKMTIQRMIALYQRRCPEAQADNAHYQALNAYADM
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RLDKCVFGENKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLLDDRRPV
HHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
PPLPEKYRPKK
CCCCCCCCCCC
>Mature Secondary Structure
MDIKVYDKCILKKTKGGEMGKRIEREKMTIQRMIALYQRRCPEAQADNAHYQALNAYADM
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RLDKCVFGENKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLLDDRRPV
HHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
PPLPEKYRPKK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]