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The map label for this gene is fimA [H]

Identifier: 238896105

GI number: 238896105

Start: 4075724

End: 4076275

Strand: Direct

Name: fimA [H]

Synonym: KP1_4244

Alternate gene names: 238896105

Gene position: 4075724-4076275 (Clockwise)

Preceding gene: 238896104

Following gene: 238896106

Centisome position: 77.65

GC content: 50.36

Gene sequence:

>552_bases
ATGAAAATGAAATCACTTTGCCTGGCAATGGCACTCGTCGGCTTGACCTCACACTATGCCGCCGCGGCGGACGGTACGCT
GAATTTTATCGGTAAAATTGTCAACTCAAGTTGCAAACTGGAAGGTGCCGATAAGAACGGTGTCATTGAAGTTACGATGG
GCTCTGTTCCGCTGTCTAAATTAAAAAATGGTACCAATGGCACCGGGCCAGAAGTTGGGGTCAATATTAGCGTCAGCGAT
TGTGAAAAGGGCACGTACTATATTGTGCTCGACGGACCTTCAGCCACCGAGGCGCCTATCCCTAACATACTGGCTCTCGA
TACGGATCCGAATTCGGCTAAAAAAGTCGGCATTAAGCTAACCGACCGCAATAATACCCCGGTCACACTCGATAAACCTT
TCGATCCCACCGTCGACCCGAGTATTACGATCGATGCCGATGGAGGCTCTGGTACCTTCTACCTGAAAGCCTATTACTAC
ACCTGGGATACAGACGAAGTCGACGCTGGCGCCGGCAATGCGACCGCCCGGTTTACCATTATGCAGGAATAA

Upstream 100 bases:

>100_bases
CGCTTTATGGCTATCACAACAACAGAGCTAACGGCTTATGCAGCGTCAATGAGTATGCCTGGCTATTAGCTTCCCTGGGT
CACAACAGAAGGAATTGGCT

Downstream 100 bases:

>100_bases
CACCTGGCCAGGGACGGCACGACGCGGATAAGGGGTAAGATATGAAAACGCTGCTGGCAGTGATCATAGGCGCTTTGGCT
TTTCAGACCCAGGCGGCCAT

Product: type 1 fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKMKSLCLAMALVGLTSHYAAAADGTLNFIGKIVNSSCKLEGADKNGVIEVTMGSVPLSKLKNGTNGTGPEVGVNISVSD
CEKGTYYIVLDGPSATEAPIPNILALDTDPNSAKKVGIKLTDRNNTPVTLDKPFDPTVDPSITIDADGGSGTFYLKAYYY
TWDTDEVDAGAGNATARFTIMQE

Sequences:

>Translated_183_residues
MKMKSLCLAMALVGLTSHYAAAADGTLNFIGKIVNSSCKLEGADKNGVIEVTMGSVPLSKLKNGTNGTGPEVGVNISVSD
CEKGTYYIVLDGPSATEAPIPNILALDTDPNSAKKVGIKLTDRNNTPVTLDKPFDPTVDPSITIDADGGSGTFYLKAYYY
TWDTDEVDAGAGNATARFTIMQE
>Mature_183_residues
MKMKSLCLAMALVGLTSHYAAAADGTLNFIGKIVNSSCKLEGADKNGVIEVTMGSVPLSKLKNGTNGTGPEVGVNISVSD
CEKGTYYIVLDGPSATEAPIPNILALDTDPNSAKKVGIKLTDRNNTPVTLDKPFDPTVDPSITIDADGGSGTFYLKAYYY
TWDTDEVDAGAGNATARFTIMQE

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19219; Mature: 19219

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKSLCLAMALVGLTSHYAAAADGTLNFIGKIVNSSCKLEGADKNGVIEVTMGSVPLSK
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCHHH
LKNGTNGTGPEVGVNISVSDCEKGTYYIVLDGPSATEAPIPNILALDTDPNSAKKVGIKL
HCCCCCCCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEE
TDRNNTPVTLDKPFDPTVDPSITIDADGGSGTFYLKAYYYTWDTDEVDAGAGNATARFTI
ECCCCCCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEE
MQE
EEC
>Mature Secondary Structure
MKMKSLCLAMALVGLTSHYAAAADGTLNFIGKIVNSSCKLEGADKNGVIEVTMGSVPLSK
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCHHH
LKNGTNGTGPEVGVNISVSDCEKGTYYIVLDGPSATEAPIPNILALDTDPNSAKKVGIKL
HCCCCCCCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEE
TDRNNTPVTLDKPFDPTVDPSITIDADGGSGTFYLKAYYYTWDTDEVDAGAGNATARFTI
ECCCCCCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEE
MQE
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1982455 [H]