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The map label for this gene is yfaO [H]

Identifier: 238895784

GI number: 238895784

Start: 3729408

End: 3729833

Strand: Direct

Name: yfaO [H]

Synonym: KP1_3895

Alternate gene names: 238895784

Gene position: 3729408-3729833 (Clockwise)

Preceding gene: 238895776

Following gene: 238895792

Centisome position: 71.06

GC content: 54.93

Gene sequence:

>426_bases
ATGCGCCAAAGGACGATTGTTTGCCCGCTGATCGAGAATGAAGGCCATTATCTGCTTTGCAAAATGGCCGCCGACCGCGG
GGTTTTTCCCGGGCAATGGGCCTTATCCGGCGGCGGCGTGGAGCCAGGGGAACGTATTGAAGAGGCGCTGCGGCGGGAAA
TACGCGAAGAGCTCGGCGAAAAACTCATCCTTACCCATATCGCGCCATGGTGCTTTCGCGACGATACCCGCGTCAAAACC
TACCCCGACGGGCATCAGGAAACGATCTACATGATCTATCTCATCTTCAACTGCGTGAGCGCCAATCGCGATGTGACGAT
CAACGAGGAGTTTGACGATTACGCCTGGGTCAAAGCCGAAGATCTCAAAAACTACGATCTTAATGCCGCCACCCGCGTTA
CTCTCAGCCTGAAAGGGCTACTTTAG

Upstream 100 bases:

>100_bases
ACTCAACAAGACCTGAACTGTATTTCGCTTGCAGTTTACCGAGGCGGCTCGCAAACTATTTCACCAGCATACCGCCCCAT
CCCTCTGCAGGAGAAAACCC

Downstream 100 bases:

>100_bases
TCCAGCATACCGCGTTCAACCCACCCGGCGTTATGCCGCGGGATAATGCGGGTGGCTACGATACGGTCGCATGCGTCTGC
TGCCTGACCCACTCGCACAG

Product: putative NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRQRTIVCPLIENEGHYLLCKMAADRGVFPGQWALSGGGVEPGERIEEALRREIREELGEKLILTHIAPWCFRDDTRVKT
YPDGHQETIYMIYLIFNCVSANRDVTINEEFDDYAWVKAEDLKNYDLNAATRVTLSLKGLL

Sequences:

>Translated_141_residues
MRQRTIVCPLIENEGHYLLCKMAADRGVFPGQWALSGGGVEPGERIEEALRREIREELGEKLILTHIAPWCFRDDTRVKT
YPDGHQETIYMIYLIFNCVSANRDVTINEEFDDYAWVKAEDLKNYDLNAATRVTLSLKGLL
>Mature_141_residues
MRQRTIVCPLIENEGHYLLCKMAADRGVFPGQWALSGGGVEPGERIEEALRREIREELGEKLILTHIAPWCFRDDTRVKT
YPDGHQETIYMIYLIFNCVSANRDVTINEEFDDYAWVKAEDLKNYDLNAATRVTLSLKGLL

Specific function: Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788585, Length=141, Percent_Identity=80.8510638297872, Blast_Score=239, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 16221; Mature: 16221

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRTIVCPLIENEGHYLLCKMAADRGVFPGQWALSGGGVEPGERIEEALRREIREELGE
CCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
KLILTHIAPWCFRDDTRVKTYPDGHQETIYMIYLIFNCVSANRDVTINEEFDDYAWVKAE
EEEHHHCCCHHCCCCCEEEECCCCCCHHHHHHHEEHHHHCCCCCEEECCCCCCEEEEECC
DLKNYDLNAATRVTLSLKGLL
CCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MRQRTIVCPLIENEGHYLLCKMAADRGVFPGQWALSGGGVEPGERIEEALRREIREELGE
CCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
KLILTHIAPWCFRDDTRVKTYPDGHQETIYMIYLIFNCVSANRDVTINEEFDDYAWVKAE
EEEHHHCCCHHCCCCCEEEECCCCCCHHHHHHHEEHHHHCCCCCEEECCCCCCEEEEECC
DLKNYDLNAATRVTLSLKGLL
CCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA