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The map label for this gene is yfaZ [H]

Identifier: 238895782

GI number: 238895782

Start: 3727488

End: 3728030

Strand: Reverse

Name: yfaZ [H]

Synonym: KP1_3890

Alternate gene names: 238895782

Gene position: 3728030-3727488 (Counterclockwise)

Preceding gene: 238895783

Following gene: 238895781

Centisome position: 71.03

GC content: 59.85

Gene sequence:

>543_bases
ATGAAAAAAAGCATTTTTATGGCGCTGGCGGGCGTGATGATGGTTTCTTCGGCGGCCCATGCGATTAGCGTTACCGGTGA
AGCCGGCGAGCATTACACCAACCTTGGCGTCGGCTTCGGCACCGAGTCCACCGGCCTGGCCGTTTCGGGTAACTGGCTGC
ACAGCGATAACGACGGCGACGCCGCGGGTTTAGGCCTGGGACTCAATATTCCGCTGGGGCCGTTCCTCGCGACCGTGGGT
GGTAAAGGTATTTACACCAATCCGAAACAGGGCGATGAAGGTTATGCGGCCGCGGTCGGCGGCGGCCTGCAGTGGAAAAT
CGGCGACAGCTTCCGCCTGTACGGCGATTATTACTACTCTCCGGATTCGCTCTCCAGCGGCATTGATAGCTACCAGGAAG
CCAACGTCGGCGCCAGCTGGACCATTATGCGTCCGCTTAGCATCCAGGCCGGCTACCGTTACCTGAACCTGGCGGGCAAA
GATGGCAACCGCGATAACACCATCGCCGACGGCCCATACATCGGCGCCAGCGCCAGCTTCTAA

Upstream 100 bases:

>100_bases
AATTCATTTCGCCAGGTCATTGATTCCTGATGGGTGCGCAGTAGAATTTTCAGGTTTTTTCGGGACTTCTTTGATTTTAA
TTTTCTGGATAGAGTAAATA

Downstream 100 bases:

>100_bases
TCTCTTCCGGCGCGGCATCTTCTTGCTGCGCCAGATTTTCCTCCTCGTCAGCATCCCGCTTTGCGTTATAGTATTTCTCA
CCTGGCAGGCAAGGAGTGAG

Product: putative porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKSIFMALAGVMMVSSAAHAISVTGEAGEHYTNLGVGFGTESTGLAVSGNWLHSDNDGDAAGLGLGLNIPLGPFLATVG
GKGIYTNPKQGDEGYAAAVGGGLQWKIGDSFRLYGDYYYSPDSLSSGIDSYQEANVGASWTIMRPLSIQAGYRYLNLAGK
DGNRDNTIADGPYIGASASF

Sequences:

>Translated_180_residues
MKKSIFMALAGVMMVSSAAHAISVTGEAGEHYTNLGVGFGTESTGLAVSGNWLHSDNDGDAAGLGLGLNIPLGPFLATVG
GKGIYTNPKQGDEGYAAAVGGGLQWKIGDSFRLYGDYYYSPDSLSSGIDSYQEANVGASWTIMRPLSIQAGYRYLNLAGK
DGNRDNTIADGPYIGASASF
>Mature_180_residues
MKKSIFMALAGVMMVSSAAHAISVTGEAGEHYTNLGVGFGTESTGLAVSGNWLHSDNDGDAAGLGLGLNIPLGPFLATVG
GKGIYTNPKQGDEGYAAAVGGGLQWKIGDSFRLYGDYYYSPDSLSSGIDSYQEANVGASWTIMRPLSIQAGYRYLNLAGK
DGNRDNTIADGPYIGASASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082072, Length=180, Percent_Identity=73.3333333333333, Blast_Score=258, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR009998 [H]

Pfam domain/function: PF07437 YfaZ [H]

EC number: NA

Molecular weight: Translated: 18647; Mature: 18647

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIFMALAGVMMVSSAAHAISVTGEAGEHYTNLGVGFGTESTGLAVSGNWLHSDNDGD
CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECEECCCCCCCCEEEECCEEECCCCCC
AAGLGLGLNIPLGPFLATVGGKGIYTNPKQGDEGYAAAVGGGLQWKIGDSFRLYGDYYYS
EEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEC
PDSLSSGIDSYQEANVGASWTIMRPLSIQAGYRYLNLAGKDGNRDNTIADGPYIGASASF
CHHHHHHHHHHHHCCCCCEEEEEECEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKSIFMALAGVMMVSSAAHAISVTGEAGEHYTNLGVGFGTESTGLAVSGNWLHSDNDGD
CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECEECCCCCCCCEEEECCEEECCCCCC
AAGLGLGLNIPLGPFLATVGGKGIYTNPKQGDEGYAAAVGGGLQWKIGDSFRLYGDYYYS
EEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEC
PDSLSSGIDSYQEANVGASWTIMRPLSIQAGYRYLNLAGKDGNRDNTIADGPYIGASASF
CHHHHHHHHHHHHCCCCCEEEEEECEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]