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The map label for this gene is yfcI [C]

Identifier: 238895783

GI number: 238895783

Start: 3728305

End: 3729291

Strand: Reverse

Name: yfcI [C]

Synonym: KP1_3894

Alternate gene names: 238895783

Gene position: 3729291-3728305 (Counterclockwise)

Preceding gene: 238895785

Following gene: 238895782

Centisome position: 71.05

GC content: 56.23

Gene sequence:

>987_bases
ATGATTATATGGAGCACCGCCATGGAAAGGGCGACGAATTCTCCCCACGATGCTGTATTTAAACACCTGCTGTCGCATCG
GGCGACGGCCAGGGATTTTCTGGACATTCACCTCCCCGCACCGCTGCGCGCGTTATGTAACCTGAACACGCTGCGGCTGG
AGTCCGGGAGCTTTATCGACGACGAACTGCGGGCGAGTCATTCCGATATCCTTTACTCGCTGCAAACGCAGGCGGGGGAG
GGCTATATCTATCTGTTGATAGAGCACCAAAGCTCGGCAGACCGCCATATGGCATTTCGCCTGATGCGCTATGCGATAGC
CGCGATGCAGCGTCATCTGGATAAAGGGCATACGCAGCTGCCGCTGGTTATCCCGCTGCTGTTTTATCATGGTCGCGTTT
CTCCCTGGCCTTACCCAATGTGCTGGCTGGCAGGCTTTGCCGATCCGGACATCGCGCGGCGGATCTATGGTGAAGATTTT
CCCTTAATTGATATCACTAGCACCCCGGACGATGAAATCATGCGCCACCGGCGCGTGGCGATGCTGGAGCTGCTGCAGAA
GCATATTCGCCAGCGGGATTTGATGGACCTGCATGAGCAGCTGGTCAGGCTCCTGGCGCTGGGATACACTAGCCGCAGGC
AGCTTAAGACGCTGTTGCACTATTTATTACAGGCAGGAAACGCCGCCGATCCGGTTGCTTTTTTGCGCCATCTTGCGCAA
AACGTTCCCCGGCGGCCGCATAAGGAGACGCTAATGAATATTGCCCAGTTTCTGGAACAACGCGGCCATCAGCAAGGATT
AAAGCAAGGTCTTGAACAAGGTCTACAGCAAGGTATCGAACAAGGTATCGAAAAAGGTATCGAGCAAGGTGAGCAGCAGA
CCGCGGAGCGTATCGCCCGGGCGATGCTTGCTAACGGACTCGACCTGTCGCTGGTGGCGAAACTGACCGGCCTCGCCCCG
GAATGTCTGGCCCGGCTGCAGCATTAA

Upstream 100 bases:

>100_bases
AGGGATGGGGCGGTATGCTGGTGAAATAGTTTGCGAGCCGCCTCGGTAAACTGCAAGCGAAATACAGTTCAGGTCTTGTT
GAGTGCTACGTTAAGCGAAA

Downstream 100 bases:

>100_bases
TTATTCCCTTATCCACCCGCGCCGCGCCGATCGTGCGGCGCCAGCTCTCTGTTTTCGTCAATGTGTCAGCGTTAATCATA
ATAAACATGAATATTACTGG

Product: putative YhgA-like transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIIWSTAMERATNSPHDAVFKHLLSHRATARDFLDIHLPAPLRALCNLNTLRLESGSFIDDELRASHSDILYSLQTQAGE
GYIYLLIEHQSSADRHMAFRLMRYAIAAMQRHLDKGHTQLPLVIPLLFYHGRVSPWPYPMCWLAGFADPDIARRIYGEDF
PLIDITSTPDDEIMRHRRVAMLELLQKHIRQRDLMDLHEQLVRLLALGYTSRRQLKTLLHYLLQAGNAADPVAFLRHLAQ
NVPRRPHKETLMNIAQFLEQRGHQQGLKQGLEQGLQQGIEQGIEKGIEQGEQQTAERIARAMLANGLDLSLVAKLTGLAP
ECLARLQH

Sequences:

>Translated_328_residues
MIIWSTAMERATNSPHDAVFKHLLSHRATARDFLDIHLPAPLRALCNLNTLRLESGSFIDDELRASHSDILYSLQTQAGE
GYIYLLIEHQSSADRHMAFRLMRYAIAAMQRHLDKGHTQLPLVIPLLFYHGRVSPWPYPMCWLAGFADPDIARRIYGEDF
PLIDITSTPDDEIMRHRRVAMLELLQKHIRQRDLMDLHEQLVRLLALGYTSRRQLKTLLHYLLQAGNAADPVAFLRHLAQ
NVPRRPHKETLMNIAQFLEQRGHQQGLKQGLEQGLQQGIEQGIEKGIEQGEQQTAERIARAMLANGLDLSLVAKLTGLAP
ECLARLQH
>Mature_328_residues
MIIWSTAMERATNSPHDAVFKHLLSHRATARDFLDIHLPAPLRALCNLNTLRLESGSFIDDELRASHSDILYSLQTQAGE
GYIYLLIEHQSSADRHMAFRLMRYAIAAMQRHLDKGHTQLPLVIPLLFYHGRVSPWPYPMCWLAGFADPDIARRIYGEDF
PLIDITSTPDDEIMRHRRVAMLELLQKHIRQRDLMDLHEQLVRLLALGYTSRRQLKTLLHYLLQAGNAADPVAFLRHLAQ
NVPRRPHKETLMNIAQFLEQRGHQQGLKQGLEQGLQQGIEQGIEKGIEQGEQQTAERIARAMLANGLDLSLVAKLTGLAP
ECLARLQH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=318, Percent_Identity=53.1446540880503, Blast_Score=332, Evalue=3e-92,
Organism=Escherichia coli, GI1789816, Length=316, Percent_Identity=51.5822784810127, Blast_Score=328, Evalue=3e-91,
Organism=Escherichia coli, GI1788577, Length=283, Percent_Identity=55.8303886925795, Blast_Score=323, Evalue=9e-90,
Organism=Escherichia coli, GI1786324, Length=311, Percent_Identity=50.1607717041801, Blast_Score=314, Evalue=5e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 37436; Mature: 37436

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIWSTAMERATNSPHDAVFKHLLSHRATARDFLDIHLPAPLRALCNLNTLRLESGSFID
CEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCEEECCCCCCC
DELRASHSDILYSLQTQAGEGYIYLLIEHQSSADRHMAFRLMRYAIAAMQRHLDKGHTQL
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLVIPLLFYHGRVSPWPYPMCWLAGFADPDIARRIYGEDFPLIDITSTPDDEIMRHRRVA
HHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH
MLELLQKHIRQRDLMDLHEQLVRLLALGYTSRRQLKTLLHYLLQAGNAADPVAFLRHLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
NVPRRPHKETLMNIAQFLEQRGHQQGLKQGLEQGLQQGIEQGIEKGIEQGEQQTAERIAR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLANGLDLSLVAKLTGLAPECLARLQH
HHHHCCCCHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MIIWSTAMERATNSPHDAVFKHLLSHRATARDFLDIHLPAPLRALCNLNTLRLESGSFID
CEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCEEECCCCCCC
DELRASHSDILYSLQTQAGEGYIYLLIEHQSSADRHMAFRLMRYAIAAMQRHLDKGHTQL
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLVIPLLFYHGRVSPWPYPMCWLAGFADPDIARRIYGEDFPLIDITSTPDDEIMRHRRVA
HHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH
MLELLQKHIRQRDLMDLHEQLVRLLALGYTSRRQLKTLLHYLLQAGNAADPVAFLRHLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
NVPRRPHKETLMNIAQFLEQRGHQQGLKQGLEQGLQQGIEQGIEKGIEQGEQQTAERIAR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLANGLDLSLVAKLTGLAPECLARLQH
HHHHCCCCHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]