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The map label for this gene is ybaR [H]

Identifier: 238895756

GI number: 238895756

Start: 3691317

End: 3692555

Strand: Direct

Name: ybaR [H]

Synonym: KP1_3862

Alternate gene names: 238895756

Gene position: 3691317-3692555 (Clockwise)

Preceding gene: 238895754

Following gene: 238895764

Centisome position: 70.33

GC content: 62.39

Gene sequence:

>1239_bases
ATGCCCCCAGTTTCTGACCCCGCCGCTTCCGGCAACCTGCGTCTCATCCTCCGCTCCCCGTCTTTACTGACGCGCGAAAT
GCTGGCCGGCGTGCTCACCGCCCTGGCGCTCATCCCTGAAGTGATTTCGTTTTCAGTCATTGCCGGCGTTGACCCGCAGG
TAAGCCTGATTGCTTCGGTGGTGCTCTGCCTGGCGATGTCAGTCTTCGGCGGACGCCCGGCGATGGTCACCGCCGCCGCG
GGCTCGGTGGCGCTGGTGATTGGCCCGATGGTGCAACAGCACGGCGTGGGGTACATTTTACCGGCTGTCATTCTGGCGGG
TATTATTCAAATTTTGTTTGGTCTGTGCGGCATGGCGCGCCTGATGCGCTTTATTCCCCCGGCGGTGATGACCGGCTTCG
TCAACGCCCTCGGGATCCTGATTTTCTTTGCTCAGGTGCCGCATTTCTGGAGTCGACAACCGCTAATCGTTGGCCTGTTC
GTCCTGACGCTGCTTATCGTCCTGTGGGCGCCGCGCGTTATTAAGGCTATCCCGGCACCGCTGATCGCCATCGTCGCGCT
CACCCTCTATACCGCGACCACCGGCCAGCAGCTGCCGACCGTCGGCGATGAAGGGTCAATGAGCGGCGGCCTGCCGGGGT
TCACCGCCCTGACCGTTCCCCTGAACCTGACCACCCTGCAGATAATCTGGCCGTGCGCCCTCAGCATCGCCTTTGTCGGC
CTGATGGAGTCCTTGCTGACGGCTAAGCTGGTAGATGATCTCACTCATACCCCGTCGAACAAATCGCGGGAAAGCGCCGG
GCTGGGTATCGCCAATATCCTTGCTGGCTGCTATGGCGGCATCGCCGGCTGCGCGATGATCGGCCAGACTATCGTGAACG
TGGAAATGGGCCGGGCCCGCAGCCGCCTCTCAACGGTAATCGCCGGCCTGGTGCTGCTCCTGCTGGTGACAGCGCTCAGC
CAGGTGATGGCGAAGATCCCGATGGCGGTTCTGGCCGGGGTGATGGTGATCGTGGCGGTGAAGACCTTTAGCTGGCACAG
CATTCGCCCGGGCGAGCTGGCGCGTAATCCGTGGCCGGAAACGCTGGTGATGCTGGTGACCGTCGCCGCGACGGTGGGAA
CCAGCAATCTGGCGATCGGTGTACTGGCGGGGATTGTCGCGATGGCGATCATCCCCCGCCGCCTGCGGGCAAAAGCGCAG
GCTACATTAGAAACAGCGTCGCCAGACCCAGAAAAATAA

Upstream 100 bases:

>100_bases
CTGACAGATTCCGCGCTATCATCCCTGGTTTTGTGACAGACCGCACGGAAGCAGGGCCTGACACCGCTCCCTCTTTTTTT
ATAAGCTGCGAACTTTTTTT

Downstream 100 bases:

>100_bases
AGAAGCCGCCGGTGTCGGTGATGGCGGTGATCATTACGCTGGAGCCGACCGCCGGGTCACGCCCCAGCTTCACCATGACC
ATCGGGATTATCACGCCCAT

Product: putative sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPPVSDPAASGNLRLILRSPSLLTREMLAGVLTALALIPEVISFSVIAGVDPQVSLIASVVLCLAMSVFGGRPAMVTAAA
GSVALVIGPMVQQHGVGYILPAVILAGIIQILFGLCGMARLMRFIPPAVMTGFVNALGILIFFAQVPHFWSRQPLIVGLF
VLTLLIVLWAPRVIKAIPAPLIAIVALTLYTATTGQQLPTVGDEGSMSGGLPGFTALTVPLNLTTLQIIWPCALSIAFVG
LMESLLTAKLVDDLTHTPSNKSRESAGLGIANILAGCYGGIAGCAMIGQTIVNVEMGRARSRLSTVIAGLVLLLLVTALS
QVMAKIPMAVLAGVMVIVAVKTFSWHSIRPGELARNPWPETLVMLVTVAATVGTSNLAIGVLAGIVAMAIIPRRLRAKAQ
ATLETASPDPEK

Sequences:

>Translated_412_residues
MPPVSDPAASGNLRLILRSPSLLTREMLAGVLTALALIPEVISFSVIAGVDPQVSLIASVVLCLAMSVFGGRPAMVTAAA
GSVALVIGPMVQQHGVGYILPAVILAGIIQILFGLCGMARLMRFIPPAVMTGFVNALGILIFFAQVPHFWSRQPLIVGLF
VLTLLIVLWAPRVIKAIPAPLIAIVALTLYTATTGQQLPTVGDEGSMSGGLPGFTALTVPLNLTTLQIIWPCALSIAFVG
LMESLLTAKLVDDLTHTPSNKSRESAGLGIANILAGCYGGIAGCAMIGQTIVNVEMGRARSRLSTVIAGLVLLLLVTALS
QVMAKIPMAVLAGVMVIVAVKTFSWHSIRPGELARNPWPETLVMLVTVAATVGTSNLAIGVLAGIVAMAIIPRRLRAKAQ
ATLETASPDPEK
>Mature_411_residues
PPVSDPAASGNLRLILRSPSLLTREMLAGVLTALALIPEVISFSVIAGVDPQVSLIASVVLCLAMSVFGGRPAMVTAAAG
SVALVIGPMVQQHGVGYILPAVILAGIIQILFGLCGMARLMRFIPPAVMTGFVNALGILIFFAQVPHFWSRQPLIVGLFV
LTLLIVLWAPRVIKAIPAPLIAIVALTLYTATTGQQLPTVGDEGSMSGGLPGFTALTVPLNLTTLQIIWPCALSIAFVGL
MESLLTAKLVDDLTHTPSNKSRESAGLGIANILAGCYGGIAGCAMIGQTIVNVEMGRARSRLSTVIAGLVLLLLVTALSQ
VMAKIPMAVLAGVMVIVAVKTFSWHSIRPGELARNPWPETLVMLVTVAATVGTSNLAIGVLAGIVAMAIIPRRLRAKAQA
TLETASPDPEK

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=420, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI193203292, Length=432, Percent_Identity=22.9166666666667, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 42859; Mature: 42728

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVSDPAASGNLRLILRSPSLLTREMLAGVLTALALIPEVISFSVIAGVDPQVSLIASV
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VLCLAMSVFGGRPAMVTAAAGSVALVIGPMVQQHGVGYILPAVILAGIIQILFGLCGMAR
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LMRFIPPAVMTGFVNALGILIFFAQVPHFWSRQPLIVGLFVLTLLIVLWAPRVIKAIPAP
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
LIAIVALTLYTATTGQQLPTVGDEGSMSGGLPGFTALTVPLNLTTLQIIWPCALSIAFVG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
LMESLLTAKLVDDLTHTPSNKSRESAGLGIANILAGCYGGIAGCAMIGQTIVNVEMGRAR
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLSTVIAGLVLLLLVTALSQVMAKIPMAVLAGVMVIVAVKTFSWHSIRPGELARNPWPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHH
TLVMLVTVAATVGTSNLAIGVLAGIVAMAIIPRRLRAKAQATLETASPDPEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PPVSDPAASGNLRLILRSPSLLTREMLAGVLTALALIPEVISFSVIAGVDPQVSLIASV
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VLCLAMSVFGGRPAMVTAAAGSVALVIGPMVQQHGVGYILPAVILAGIIQILFGLCGMAR
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LMRFIPPAVMTGFVNALGILIFFAQVPHFWSRQPLIVGLFVLTLLIVLWAPRVIKAIPAP
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
LIAIVALTLYTATTGQQLPTVGDEGSMSGGLPGFTALTVPLNLTTLQIIWPCALSIAFVG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
LMESLLTAKLVDDLTHTPSNKSRESAGLGIANILAGCYGGIAGCAMIGQTIVNVEMGRAR
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLSTVIAGLVLLLLVTALSQVMAKIPMAVLAGVMVIVAVKTFSWHSIRPGELARNPWPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHH
TLVMLVTVAATVGTSNLAIGVLAGIVAMAIIPRRLRAKAQATLETASPDPEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]