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The map label for this gene is yeiE [H]

Identifier: 238895721

GI number: 238895721

Start: 3652692

End: 3653558

Strand: Reverse

Name: yeiE [H]

Synonym: KP1_3822

Alternate gene names: 238895721

Gene position: 3653558-3652692 (Counterclockwise)

Preceding gene: 238895724

Following gene: 238895720

Centisome position: 69.61

GC content: 61.82

Gene sequence:

>867_bases
ATGCATATTACGCTGCGGCAGCTGGAAGTGTTCGCCGAAGTCCACAAGAGTGGGTCGACCACTCAGGCGTCACAGATGCT
GGCGCTTTCGCAATCCGCGGTCAGCGCCGCGCTGACCGATCTGGAAGGGCAGCTCGGCGTGCAGCTGTTTGACCGCGTCG
GTAAACGACTGGTGGTGAATGAGCATGGACGGCTGCTGTACCCGCGTGCGCTGGCGCTGCTGGAGCGGGCCCTGGAGATC
GAGCAGCTGTTTCGCGGCGATAACGGGGCGATCCGAGTCTACGCCAGCAGCACCATCGGCAACTATATTATGCCGGAGAT
TATTGCCCGCTATCGTCATGACTTCCCGGATCTGCCGGTCGAGCTGAGCGTCGGCAACAGCCTGGACGTCATCAACGCCG
TCGCCGACCTGCGGGTGGATTTCGGCCTGATTGAGGGGCCGTGCCATGCCGCCGATATTATTGCCGAGCCGTGGCTGGAG
GATGAGCTGGTGGTGTTTGCCGCGCCCAACTCACCGCTGCTGGCGGGGGAGGTGACCCTGCAGCAACTGGCCGAGGCGCC
GTGGATCCTGCGCGAGCATGGCTCCGGCACCCGGGAGATTGTCGATTACGTTCTGCTGTCGCATCTGCCGGCGTTTCATC
TGGGCATGGAGCTGGGTAATTCAGAGGCGATCAAGCACGCGGTCAGGCATGGCCTGGGCATCAGCTGTCTATCGCGGCGG
GTGATTGCCGAACAGCTTGCCTCGGGCACGCTGGCGGAACTGAAAGTGCCATTGCCCCGGCTGACGCGCACGCTGTGGCG
GATCCATCACCGGCAGAAGCATATTTCTAAAGCATTACAACGTTTTCTGCACTATTGCCAGGTGTAG

Upstream 100 bases:

>100_bases
GATTTTGTGATATAAGCGGATTTTCCTTCCGTCAGCCGCCTCGATTTGTGTCACCATAGTAAGGAAGGTTATTCAGGTTG
GATTACTAAACGGGTGGGTT

Downstream 100 bases:

>100_bases
CAGCCCGGTTTTATCGCCTGATTACGGGGGGAATTCGCTGGCAATTCCGCAGGTTAGTGCTTTACTAATAATTTGCGGGC
GATCATGAAGCTCTCTTATA

Product: putative DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MHITLRQLEVFAEVHKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLERALEI
EQLFRGDNGAIRVYASSTIGNYIMPEIIARYRHDFPDLPVELSVGNSLDVINAVADLRVDFGLIEGPCHAADIIAEPWLE
DELVVFAAPNSPLLAGEVTLQQLAEAPWILREHGSGTREIVDYVLLSHLPAFHLGMELGNSEAIKHAVRHGLGISCLSRR
VIAEQLASGTLAELKVPLPRLTRTLWRIHHRQKHISKALQRFLHYCQV

Sequences:

>Translated_288_residues
MHITLRQLEVFAEVHKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLERALEI
EQLFRGDNGAIRVYASSTIGNYIMPEIIARYRHDFPDLPVELSVGNSLDVINAVADLRVDFGLIEGPCHAADIIAEPWLE
DELVVFAAPNSPLLAGEVTLQQLAEAPWILREHGSGTREIVDYVLLSHLPAFHLGMELGNSEAIKHAVRHGLGISCLSRR
VIAEQLASGTLAELKVPLPRLTRTLWRIHHRQKHISKALQRFLHYCQV
>Mature_288_residues
MHITLRQLEVFAEVHKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLERALEI
EQLFRGDNGAIRVYASSTIGNYIMPEIIARYRHDFPDLPVELSVGNSLDVINAVADLRVDFGLIEGPCHAADIIAEPWLE
DELVVFAAPNSPLLAGEVTLQQLAEAPWILREHGSGTREIVDYVLLSHLPAFHLGMELGNSEAIKHAVRHGLGISCLSRR
VIAEQLASGTLAELKVPLPRLTRTLWRIHHRQKHISKALQRFLHYCQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=286, Percent_Identity=83.5664335664336, Blast_Score=493, Evalue=1e-141,
Organism=Escherichia coli, GI1788748, Length=286, Percent_Identity=28.6713286713287, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082132, Length=291, Percent_Identity=26.4604810996564, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787601, Length=210, Percent_Identity=27.1428571428571, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788296, Length=244, Percent_Identity=27.0491803278689, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786401, Length=306, Percent_Identity=25.1633986928105, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI157672245, Length=287, Percent_Identity=26.4808362369338, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1789506, Length=197, Percent_Identity=28.9340101522843, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI145693105, Length=297, Percent_Identity=24.9158249158249, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789639, Length=191, Percent_Identity=27.2251308900524, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787530, Length=244, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788297, Length=242, Percent_Identity=24.7933884297521, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787879, Length=247, Percent_Identity=24.6963562753036, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789204, Length=275, Percent_Identity=24.7272727272727, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081904, Length=214, Percent_Identity=24.7663551401869, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787806, Length=165, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31951; Mature: 31951

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITLRQLEVFAEVHKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEC
EHGRLLYPRALALLERALEIEQLFRGDNGAIRVYASSTIGNYIMPEIIARYRHDFPDLPV
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCE
ELSVGNSLDVINAVADLRVDFGLIEGPCHAADIIAEPWLEDELVVFAAPNSPLLAGEVTL
EEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEHHHHH
QQLAEAPWILREHGSGTREIVDYVLLSHLPAFHLGMELGNSEAIKHAVRHGLGISCLSRR
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
VIAEQLASGTLAELKVPLPRLTRTLWRIHHRQKHISKALQRFLHYCQV
HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHITLRQLEVFAEVHKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEC
EHGRLLYPRALALLERALEIEQLFRGDNGAIRVYASSTIGNYIMPEIIARYRHDFPDLPV
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCE
ELSVGNSLDVINAVADLRVDFGLIEGPCHAADIIAEPWLEDELVVFAAPNSPLLAGEVTL
EEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEHHHHH
QQLAEAPWILREHGSGTREIVDYVLLSHLPAFHLGMELGNSEAIKHAVRHGLGISCLSRR
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
VIAEQLASGTLAELKVPLPRLTRTLWRIHHRQKHISKALQRFLHYCQV
HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]