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The map label for this gene is yedR [H]

Identifier: 238895490

GI number: 238895490

Start: 3375609

End: 3375926

Strand: Reverse

Name: yedR [H]

Synonym: KP1_3562

Alternate gene names: 238895490

Gene position: 3375926-3375609 (Counterclockwise)

Preceding gene: 238895493

Following gene: 238895489

Centisome position: 64.32

GC content: 56.92

Gene sequence:

>318_bases
GTGACAATAGTCTGTTGTGTCACGGAGAGGAATGAGATGGAAGAGCAGGCAAAACGCAGCCCGGGAGGGAAACTTGCGCT
CTGGGCGTTGTATGCTTTTTGCGGATATTGTGTCTGGGTCATTGTGCGTTACTGGTGGGTAGTGGGAAAAATTCACAGCG
TTCCCGGCGCCAGCGTGGAGGGTGATTTTGGAACAACGGCCGGGAAATGGCTTGGCGCCCTGTTGGGTATGCTGGTCCTC
GGCGGCATTGGCTCTATTCTCGGCGCGGTCGTCTGGTATACGCGTCCATCCCGCGGCGAGCAGGATCATCAGCGCTAA

Upstream 100 bases:

>100_bases
GCATTGGCAGCATAAGTCGCGAGAAGGCGCAGAAGACAAAGATGAAACTGCTGCCTGTGACGCAGGTTAGCGGTATAATG
TGATGCGTGTCACGTTTTGA

Downstream 100 bases:

>100_bases
AATTGCTATGCTCGAGGCTGACCCTCAGATAAAGGAAAGCCTATGGACCTGGTTGACTGGCAGCAACGATTTGAGCGCTG
GATACTGACGCACCATGCGC

Product: putative outer membrane protein N precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTIVCCVTERNEMEEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDFGTTAGKWLGALLGMLVL
GGIGSILGAVVWYTRPSRGEQDHQR

Sequences:

>Translated_105_residues
MTIVCCVTERNEMEEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDFGTTAGKWLGALLGMLVL
GGIGSILGAVVWYTRPSRGEQDHQR
>Mature_104_residues
TIVCCVTERNEMEEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDFGTTAGKWLGALLGMLVLG
GIGSILGAVVWYTRPSRGEQDHQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082008, Length=86, Percent_Identity=55.8139534883721, Blast_Score=109, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11547; Mature: 11415

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVCCVTERNEMEEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVE
CEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GDFGTTAGKWLGALLGMLVLGGIGSILGAVVWYTRPSRGEQDHQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TIVCCVTERNEMEEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVE
EEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GDFGTTAGKWLGALLGMLVLGGIGSILGAVVWYTRPSRGEQDHQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]