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The map label for this gene is yedJ [H]

Identifier: 238895489

GI number: 238895489

Start: 3374859

End: 3375566

Strand: Reverse

Name: yedJ [H]

Synonym: KP1_3561

Alternate gene names: 238895489

Gene position: 3375566-3374859 (Counterclockwise)

Preceding gene: 238895490

Following gene: 238895488

Centisome position: 64.31

GC content: 59.6

Gene sequence:

>708_bases
ATGGACCTGGTTGACTGGCAGCAACGATTTGAGCGCTGGATACTGACGCACCATGCGCAGGATGACGCCGCACACGATCT
GTCCCATTTTCGTCGCGTCTGGGCGACCGCCACTCAGCTGGCCGCGGGGGAGGAAGTCGACCGGCTGGTACTCCTCACGG
CCTGCTATTTTCATGACATCGTCAGCTTGCCAAAAAATCATCCGGAGCGAAGTCGATCCTCGATGATGGCCGCCGAGAAA
ACCCTCGCCATTCTGCAGTCGGCCTTTGCTGATTTTCCTGCGGATCGTTACCCGGCGGTCAGCCATGCCATCGAGGCGCA
CAGCTTCAGCGCGGCGATCCCACCGCGCACGCTGGAGGCGAAAATAGTTCAGGATGCCGATCGACTCGAGTCGCTGGGAG
CCATTGGTCTGGCGAGGGTCTTCGCTGTCGCCGGCGCCCTGAATACCATCTTGTTTGATGCCGAAGATCCTTTTGCTGAT
CGGCGGGCGCTGGATGACCGCAAATATGCCCTCGACCATTTCCAGTGCAAACTTCTGCGCCTGCCGGAAACCATGCAAAC
TGACAAGGGGAAAGCGATGGCGCAGCATAATGCCCGTTTTCTCGTCGAATTTATGGCTAAGCTCAGCGCGGAGCTGCAGG
GGGAGCCGCTGGCGCTGGATGAAGCGGTTTTGCGCCGCTTTGCACCGCAGGCGTCAACCGACCGGTGA

Upstream 100 bases:

>100_bases
CGGCGCGGTCGTCTGGTATACGCGTCCATCCCGCGGCGAGCAGGATCATCAGCGCTAAAATTGCTATGCTCGAGGCTGAC
CCTCAGATAAAGGAAAGCCT

Downstream 100 bases:

>100_bases
TTTATGGTACTCTCTGCCAAAATCGTCCGCGTTGGTTGAGGATATGCCGCAAAAGTTAAGCAAGGAACACAGGTCGTTGT
CGTTGGCTGAACAGGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDLVDWQQRFERWILTHHAQDDAAHDLSHFRRVWATATQLAAGEEVDRLVLLTACYFHDIVSLPKNHPERSRSSMMAAEK
TLAILQSAFADFPADRYPAVSHAIEAHSFSAAIPPRTLEAKIVQDADRLESLGAIGLARVFAVAGALNTILFDAEDPFAD
RRALDDRKYALDHFQCKLLRLPETMQTDKGKAMAQHNARFLVEFMAKLSAELQGEPLALDEAVLRRFAPQASTDR

Sequences:

>Translated_235_residues
MDLVDWQQRFERWILTHHAQDDAAHDLSHFRRVWATATQLAAGEEVDRLVLLTACYFHDIVSLPKNHPERSRSSMMAAEK
TLAILQSAFADFPADRYPAVSHAIEAHSFSAAIPPRTLEAKIVQDADRLESLGAIGLARVFAVAGALNTILFDAEDPFAD
RRALDDRKYALDHFQCKLLRLPETMQTDKGKAMAQHNARFLVEFMAKLSAELQGEPLALDEAVLRRFAPQASTDR
>Mature_235_residues
MDLVDWQQRFERWILTHHAQDDAAHDLSHFRRVWATATQLAAGEEVDRLVLLTACYFHDIVSLPKNHPERSRSSMMAAEK
TLAILQSAFADFPADRYPAVSHAIEAHSFSAAIPPRTLEAKIVQDADRLESLGAIGLARVFAVAGALNTILFDAEDPFAD
RRALDDRKYALDHFQCKLLRLPETMQTDKGKAMAQHNARFLVEFMAKLSAELQGEPLALDEAVLRRFAPQASTDR

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=228, Percent_Identity=67.5438596491228, Blast_Score=316, Evalue=7e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26391; Mature: 26391

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVDWQQRFERWILTHHAQDDAAHDLSHFRRVWATATQLAAGEEVDRLVLLTACYFHDI
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VSLPKNHPERSRSSMMAAEKTLAILQSAFADFPADRYPAVSHAIEAHSFSAAIPPRTLEA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHH
KIVQDADRLESLGAIGLARVFAVAGALNTILFDAEDPFADRRALDDRKYALDHFQCKLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCHHHHHHHHHHHHHHH
LPETMQTDKGKAMAQHNARFLVEFMAKLSAELQGEPLALDEAVLRRFAPQASTDR
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDLVDWQQRFERWILTHHAQDDAAHDLSHFRRVWATATQLAAGEEVDRLVLLTACYFHDI
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VSLPKNHPERSRSSMMAAEKTLAILQSAFADFPADRYPAVSHAIEAHSFSAAIPPRTLEA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHH
KIVQDADRLESLGAIGLARVFAVAGALNTILFDAEDPFADRRALDDRKYALDHFQCKLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCHHHHHHHHHHHHHHH
LPETMQTDKGKAMAQHNARFLVEFMAKLSAELQGEPLALDEAVLRRFAPQASTDR
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]