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The map label for this gene is yoaB [H]

Identifier: 238895385

GI number: 238895385

Start: 3272065

End: 3272457

Strand: Direct

Name: yoaB [H]

Synonym: KP1_3451

Alternate gene names: 238895385

Gene position: 3272065-3272457 (Clockwise)

Preceding gene: 238895379

Following gene: 238895387

Centisome position: 62.34

GC content: 55.47

Gene sequence:

>393_bases
ATGGCAGTCTTGCCGCAGCCGAATGGAATGCTTAAAGAGGAAAAAGCAATGACAATTACGCGTATTGATGCCGAAGCACG
TTGGTCAGACGTGGTGATCCACAACCAGACCCTGTACTACACCGGCGTGCCGGCAAATCTCGATGCCGACGCTTTCGAGC
AGACCGCCAATACCCTGGCGCAGATTGACGCGGTGCTGGAAAAACAGGGCAGCGACAAGTCGCGTATTCTTGACGCCACC
ATCTTCCTCGCCGATAAAAGCGACTTTGCGGCGATGAATAAAGCCTGGGACGCGTGGGTGGTGGCTGGTCACGCCCCGGT
GCGCTGCACGGTGGAAGCGACGCTGATGAACCCGCAGTATAAAGTTGAGATCAAAATTATCGCCGCGGTGTAA

Upstream 100 bases:

>100_bases
GCAAAATCGTCGATCACATTGCCCCCTGGTTATTTGGACAGTGATTATGTCAGGGAGGACGGCGTTTCGCCAGTCCGGGT
AGTGACGCGAGCGGCACATT

Downstream 100 bases:

>100_bases
TTACTCGTCCTCATCCTCATCTTCAAAGCGCGCGACGATCTGCTCGCCGGTATGCGTTGCGCGCAGCTCTTCCGCCACCA
GGGCAATCGCCTGGCCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAVLPQPNGMLKEEKAMTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLAQIDAVLEKQGSDKSRILDAT
IFLADKSDFAAMNKAWDAWVVAGHAPVRCTVEATLMNPQYKVEIKIIAAV

Sequences:

>Translated_130_residues
MAVLPQPNGMLKEEKAMTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLAQIDAVLEKQGSDKSRILDAT
IFLADKSDFAAMNKAWDAWVVAGHAPVRCTVEATLMNPQYKVEIKIIAAV
>Mature_129_residues
AVLPQPNGMLKEEKAMTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLAQIDAVLEKQGSDKSRILDATI
FLADKSDFAAMNKAWDAWVVAGHAPVRCTVEATLMNPQYKVEIKIIAAV

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=91.2280701754386, Blast_Score=217, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14291; Mature: 14160

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLPQPNGMLKEEKAMTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLA
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHH
QIDAVLEKQGSDKSRILDATIFLADKSDFAAMNKAWDAWVVAGHAPVRCTVEATLMNPQY
HHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHCCCCCEEEEECCCCEEEEEEEEEECCCE
KVEIKIIAAV
EEEEEEEEEC
>Mature Secondary Structure 
AVLPQPNGMLKEEKAMTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLA
CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHH
QIDAVLEKQGSDKSRILDATIFLADKSDFAAMNKAWDAWVVAGHAPVRCTVEATLMNPQY
HHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHCCCCCEEEEECCCCEEEEEEEEEECCCE
KVEIKIIAAV
EEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]