Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 238895367

GI number: 238895367

Start: 3255106

End: 3256404

Strand: Reverse

Name: dadA [H]

Synonym: KP1_3432

Alternate gene names: 238895367

Gene position: 3256404-3255106 (Counterclockwise)

Preceding gene: 238895368

Following gene: 238895366

Centisome position: 62.04

GC content: 63.66

Gene sequence:

>1299_bases
ATGCGTGTCGTCATACTGGGAAGTGGGGTGGTTGGGGTAGCCAGCGCGTGGTATTTGAGTCAGGCGGGTCATGACGTGAC
GGTCATCGACCGTCAGCCCGGTCCGGCAGAGGAGACCAGCGCGGCCAACGCCGGGCAGATTTCTCCCGGCTATGCGGCGC
CCTGGGCGGCGCCGGGGGTGCCGCTGAAGGCGATCAAATGGATGTTTCAGCGCCATGCGCCGCTGGCGATCGGTCTTGAC
GGCACCTCGTTCCAGTTGAAGTGGATGTGGCAGATGCTGCGCAACTGCGACACCCGCCACTATATGGAGAACAAAGGCCG
TATGGTGCGCCTGGCGGAGTACAGCCGCGACTGCCTGAAGGCGCTGCGCGACACCACCGGCATTCAGTATGAAGGGCGCC
AGGGCGGGACGCTGCAGCTGTTCCGTACCGCCAAACAGTATGAAAATGCCACCCGCGACATCGCGGTGCTGGAGGACGCC
GGCGTGCCGTATCAGCTGCTGGAAGCGAAGCGGTTGGCGGAGGTGGAGCCGGCGCTGGCGGAGGTCAGCCACAAACTGAC
CGGCGGCCTGCGTCTGCCAAATGATGAAACCGGCGACTGCCAGCTGTTTACCACCCGTCTGGCGGCAATGGCGGAACAGG
CCGGCGTGACCTTCCGCTTCAACACCGCAGTGGATGCGCTGCTGCACGAGGGCGATCGCATTGCCGGGGTGAAATGCGGC
GATGAGATTATCAAGGGCGATGCCTATGTGATGGCCTTCGGCTCCTACTCGACGGCGATGCTTAAAGGGCTGGTGGATAT
ACCGGTCTACCCGCTGAAAGGCTACTCATTGACTATTCCGATCGCTCAGGAGGACGGCGCGCCGGTTTCAACTATCCTTG
ATGAGACTTACAAAATCGCCATCACCCGCTTCGATCAGCGCATTCGGGTCGGCGGCATGGCGGAGATCGTCGGTTTTAAC
AAAGCGCTGCTGCAGCCGCGTCGCGAAACCCTGGAGATGGTGGTGCGCGATCTGTTCCCGCGCGGCGGCCACGTGGAGCA
GGCGACTTTCTGGACGGGCCTGCGGCCGATGACGCCGGACGGCACGCCGGTGGTCGGCCGCACAGCGTATAAAAATCTGT
GGCTCAACACCGGCCACGGCACGCTTGGCTGGACCATGGCCTGCGGCTCCGGGCAGCTTATCAGCGATCTGATCTCCGGC
CGCACGCCGGCGATCCCTTACGACGATCTGGCGGTTGCCCGCTACAGCCCCGGTTTTACCCCGGCGCGCCCGCAGCACCT
GCACGGCGCACACAACTAA

Upstream 100 bases:

>100_bases
GAGTTAAGTCACCATAAATAAAGCGTATGTTGAATAATATTTTCAACTGAGTTATCAATTTGTAATTAGATGATTGTTCT
TTAACTGTTACGGAGTCGCT

Downstream 100 bases:

>100_bases
GGAGCTTGCATGACCCGTCCGGTAGTGGCCAGCATCGACCTGCTGGCCTTGCGGCAGAATTTACAGATAGTGCGTCGCGC
GGCCCCCGGGTCGCGCCTGT

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRVVILGSGVVGVASAWYLSQAGHDVTVIDRQPGPAEETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAIGLD
GTSFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKALRDTTGIQYEGRQGGTLQLFRTAKQYENATRDIAVLEDA
GVPYQLLEAKRLAEVEPALAEVSHKLTGGLRLPNDETGDCQLFTTRLAAMAEQAGVTFRFNTAVDALLHEGDRIAGVKCG
DEIIKGDAYVMAFGSYSTAMLKGLVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDQRIRVGGMAEIVGFN
KALLQPRRETLEMVVRDLFPRGGHVEQATFWTGLRPMTPDGTPVVGRTAYKNLWLNTGHGTLGWTMACGSGQLISDLISG
RTPAIPYDDLAVARYSPGFTPARPQHLHGAHN

Sequences:

>Translated_432_residues
MRVVILGSGVVGVASAWYLSQAGHDVTVIDRQPGPAEETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAIGLD
GTSFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKALRDTTGIQYEGRQGGTLQLFRTAKQYENATRDIAVLEDA
GVPYQLLEAKRLAEVEPALAEVSHKLTGGLRLPNDETGDCQLFTTRLAAMAEQAGVTFRFNTAVDALLHEGDRIAGVKCG
DEIIKGDAYVMAFGSYSTAMLKGLVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDQRIRVGGMAEIVGFN
KALLQPRRETLEMVVRDLFPRGGHVEQATFWTGLRPMTPDGTPVVGRTAYKNLWLNTGHGTLGWTMACGSGQLISDLISG
RTPAIPYDDLAVARYSPGFTPARPQHLHGAHN
>Mature_432_residues
MRVVILGSGVVGVASAWYLSQAGHDVTVIDRQPGPAEETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAIGLD
GTSFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKALRDTTGIQYEGRQGGTLQLFRTAKQYENATRDIAVLEDA
GVPYQLLEAKRLAEVEPALAEVSHKLTGGLRLPNDETGDCQLFTTRLAAMAEQAGVTFRFNTAVDALLHEGDRIAGVKCG
DEIIKGDAYVMAFGSYSTAMLKGLVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDQRIRVGGMAEIVGFN
KALLQPRRETLEMVVRDLFPRGGHVEQATFWTGLRPMTPDGTPVVGRTAYKNLWLNTGHGTLGWTMACGSGQLISDLISG
RTPAIPYDDLAVARYSPGFTPARPQHLHGAHN

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=432, Percent_Identity=89.3518518518518, Blast_Score=806, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47202; Mature: 47202

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVASAWYLSQAGHDVTVIDRQPGPAEETSAANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAIGLDGTSFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHH
ALRDTTGIQYEGRQGGTLQLFRTAKQYENATRDIAVLEDAGVPYQLLEAKRLAEVEPALA
HHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHH
EVSHKLTGGLRLPNDETGDCQLFTTRLAAMAEQAGVTFRFNTAVDALLHEGDRIAGVKCG
HHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEECC
DEIIKGDAYVMAFGSYSTAMLKGLVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIA
HHHHCCCEEEEEECCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCHHHHHCCHHEEE
ITRFDQRIRVGGMAEIVGFNKALLQPRRETLEMVVRDLFPRGGHVEQATFWTGLRPMTPD
EEECCCHHCCCCCHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
GTPVVGRTAYKNLWLNTGHGTLGWTMACGSGQLISDLISGRTPAIPYDDLAVARYSPGFT
CCCCCCCHHHCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCC
PARPQHLHGAHN
CCCCCCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVASAWYLSQAGHDVTVIDRQPGPAEETSAANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAIGLDGTSFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHH
ALRDTTGIQYEGRQGGTLQLFRTAKQYENATRDIAVLEDAGVPYQLLEAKRLAEVEPALA
HHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHH
EVSHKLTGGLRLPNDETGDCQLFTTRLAAMAEQAGVTFRFNTAVDALLHEGDRIAGVKCG
HHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEECC
DEIIKGDAYVMAFGSYSTAMLKGLVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIA
HHHHCCCEEEEEECCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCHHHHHCCHHEEE
ITRFDQRIRVGGMAEIVGFNKALLQPRRETLEMVVRDLFPRGGHVEQATFWTGLRPMTPD
EEECCCHHCCCCCHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
GTPVVGRTAYKNLWLNTGHGTLGWTMACGSGQLISDLISGRTPAIPYDDLAVARYSPGFT
CCCCCCCHHHCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCC
PARPQHLHGAHN
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9457858 [H]