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The map label for this gene is ydiY [H]

Identifier: 238895238

GI number: 238895238

Start: 3119121

End: 3119879

Strand: Reverse

Name: ydiY [H]

Synonym: KP1_3289

Alternate gene names: 238895238

Gene position: 3119879-3119121 (Counterclockwise)

Preceding gene: 238895242

Following gene: 238895237

Centisome position: 59.44

GC content: 56.65

Gene sequence:

>759_bases
ATGAAGCTTTTAAAGACAGTACCCGCAGCGGTTATGCTGGCGGGGGGGCTTTTTGCGTCTGTTGGCGCAATGGCCGATGA
TTCTGTATTTACCGTCATGGATGACCCTTCCGCTGCCAAAAAACCGTTCGAAGGGGTGGTTAACGCAGGCTACCTGGCGC
AGTCCGGCAACACCAAGAGCTCTTCGATGACGGCGGATTCCACCCTGACCTGGTATGGTAATACCACCGCCTGGTCGCTG
TGGGGCAACGCCAGCAACACGTCGTCCAATGATGAGCGATCCTCAGAAAAATATGCTGTCGGCGGACGTAGCCGCTACAA
CCTGACCGATATGAACTATGTCTTTGGTCAGGGAAGCTGGCTAACTGACCGCTACAACGGCTATCAACAGCGCGATGTTG
TGACGGCGGGCTATGGTCGTCAGATCCTCAACGGGCCGGTGCACAGTCTGCGGTTTGAATTCGGTCCTGGCGTTCGCTAT
GACGAATATACCGACGGGGATACTGATACCCAGCCGCTGGGTTATGCTTCGGGTACATGGGCCTGGCAGATGACCGATAA
CGCCAAATTTTCGCAAGGGGTATCGGTGTTCGGCGCCGAGGACACCACGGTCAACTCAGAGAGCGCGTTAAACGTGGCGA
TTAACGCCCATTTCGCCCTGAAGGTCGCCTACAACGTGACCTGGAACTCTGAGCCGCCTGCGTCCGCGCCGGAGCATACC
GATCGCCGGACCTCGCTCTCCCTCGGGTATAAGATGTAA

Upstream 100 bases:

>100_bases
TCTCTTTTATGTTGTACGGACGCTAAATTCAATGAGCCGGCGAGATTATGCCTGTTCATCATTTGTACTGTCCTAAAAAA
ATGTATTTTAGAGAGTTATA

Downstream 100 bases:

>100_bases
TATTTCAGGCCGGGTTTTCCCCGGCCTGTTCGTTTTGGTTTTAGCAATTCGTGATATTATTTTTTCTGGCCGTTCGTTTT
ACTTTTTGTAAAAAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKLLKTVPAAVMLAGGLFASVGAMADDSVFTVMDDPSAAKKPFEGVVNAGYLAQSGNTKSSSMTADSTLTWYGNTTAWSL
WGNASNTSSNDERSSEKYAVGGRSRYNLTDMNYVFGQGSWLTDRYNGYQQRDVVTAGYGRQILNGPVHSLRFEFGPGVRY
DEYTDGDTDTQPLGYASGTWAWQMTDNAKFSQGVSVFGAEDTTVNSESALNVAINAHFALKVAYNVTWNSEPPASAPEHT
DRRTSLSLGYKM

Sequences:

>Translated_252_residues
MKLLKTVPAAVMLAGGLFASVGAMADDSVFTVMDDPSAAKKPFEGVVNAGYLAQSGNTKSSSMTADSTLTWYGNTTAWSL
WGNASNTSSNDERSSEKYAVGGRSRYNLTDMNYVFGQGSWLTDRYNGYQQRDVVTAGYGRQILNGPVHSLRFEFGPGVRY
DEYTDGDTDTQPLGYASGTWAWQMTDNAKFSQGVSVFGAEDTTVNSESALNVAINAHFALKVAYNVTWNSEPPASAPEHT
DRRTSLSLGYKM
>Mature_252_residues
MKLLKTVPAAVMLAGGLFASVGAMADDSVFTVMDDPSAAKKPFEGVVNAGYLAQSGNTKSSSMTADSTLTWYGNTTAWSL
WGNASNTSSNDERSSEKYAVGGRSRYNLTDMNYVFGQGSWLTDRYNGYQQRDVVTAGYGRQILNGPVHSLRFEFGPGVRY
DEYTDGDTDTQPLGYASGTWAWQMTDNAKFSQGVSVFGAEDTTVNSESALNVAINAHFALKVAYNVTWNSEPPASAPEHT
DRRTSLSLGYKM

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=84.5238095238095, Blast_Score=453, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27298; Mature: 27298

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKTVPAAVMLAGGLFASVGAMADDSVFTVMDDPSAAKKPFEGVVNAGYLAQSGNTKS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHCCCHHHHHCCCEEECCCCCCC
SSMTADSTLTWYGNTTAWSLWGNASNTSSNDERSSEKYAVGGRSRYNLTDMNYVFGQGSW
CCEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEECCCCE
LTDRYNGYQQRDVVTAGYGRQILNGPVHSLRFEFGPGVRYDEYTDGDTDTQPLGYASGTW
ECHHCCCCCCCCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQMTDNAKFSQGVSVFGAEDTTVNSESALNVAINAHFALKVAYNVTWNSEPPASAPEHT
EEEEECCCCCCCCCEEECCCCCEECCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCC
DRRTSLSLGYKM
CCCEEEECCCCC
>Mature Secondary Structure
MKLLKTVPAAVMLAGGLFASVGAMADDSVFTVMDDPSAAKKPFEGVVNAGYLAQSGNTKS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHCCCHHHHHCCCEEECCCCCCC
SSMTADSTLTWYGNTTAWSLWGNASNTSSNDERSSEKYAVGGRSRYNLTDMNYVFGQGSW
CCEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEECCCCE
LTDRYNGYQQRDVVTAGYGRQILNGPVHSLRFEFGPGVRYDEYTDGDTDTQPLGYASGTW
ECHHCCCCCCCCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQMTDNAKFSQGVSVFGAEDTTVNSESALNVAINAHFALKVAYNVTWNSEPPASAPEHT
EEEEECCCCCCCCCEEECCCCCEECCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCC
DRRTSLSLGYKM
CCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]