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The map label for this gene is tonB [H]

Identifier: 238895242

GI number: 238895242

Start: 3122569

End: 3123357

Strand: Reverse

Name: tonB [H]

Synonym: KP1_3293

Alternate gene names: 238895242

Gene position: 3123357-3122569 (Counterclockwise)

Preceding gene: 238895245

Following gene: 238895238

Centisome position: 59.51

GC content: 59.06

Gene sequence:

>789_bases
TTGCATTTAAAATCGGAGCATCATTTTTCAACAGAAACGACTATGAGCGCAATGACCCTTGATTTACCTCGCCGCTTTCC
GTGGCCAACGCTGCTGTCCGTGGCTATCCACGGTGCCGTTGTGGCGGGGCTGCTTTATACCTCGGTACATCAGGTTATTG
AACAGCCTTCTCCGACGCAGCCGATAGAGATCACAATGGTGGCGCCGGCCGATCTTGAGCCGCCTCCGGCGGCGCAGCCT
GTCGTGGAGCCCGTTGTTGAACCCGAACCTGAGCCGGAGCCAGAGGTAGCGCCTGAACCGCCGAAAGAGGCGCCGGTGGT
GATCCATAAACCGGAACCTAAGCCGAAGCCCAAACCTAAACCCAAGCCTAAGCCGGAGAAAAAGGTTGAACAGCCGAAGC
GGGAAGTGAAGCCGGCAGCAGAGCCGCGTCCGGCCTCGCCGTTTGAAAACAACAATACGGCGCCGGCGCGTACAGCGCCA
AGTACCTCGACCGCAGCGGCTAAACCCACCGTTACTGCTCCGAGCGGCCCGCGGGCGATCAGCCGCGTTCAGCCGTCCTA
TCCGGCGCGCGCTCAGGCGCTGCGCATTGAAGGGACGGTACGGGTGAAGTTTGACGTTTCGCCTGATGGCCGCATTGATA
ATCTGCAGATCCTCTCTGCTCAGCCGGCGAATATGTTCGAACGCGAGGTGAAAAGCGCGATGCGCAGATGGCGTTATGAG
CAGGGAAGACCGGGTACCGGCGTAACGATGACCATCAAATTCCGCCTGAACGGCGTCGAGATTAACTGA

Upstream 100 bases:

>100_bases
ATGCGCTCTGGAGTGGAAAGCACTGCCGACGCAGCTTTTTTCTGCAAATGGCGGCAAAAATTGACTCAGGTTAAGACGCC
TTATTGAATATGATTGCTAT

Downstream 100 bases:

>100_bases
TAAAACGCTGCGGCGGACCGGCAAGGTCCGCCGTGAAGCTTGTTTAACGCATTTTCTCCATCAATACATCATCCAGCGCC
TGCTGGGCCGTTACCAGGTG

Product: transport protein TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MHLKSEHHFSTETTMSAMTLDLPRRFPWPTLLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQP
VVEPVVEPEPEPEPEVAPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENNNTAPARTAP
STSTAAAKPTVTAPSGPRAISRVQPSYPARAQALRIEGTVRVKFDVSPDGRIDNLQILSAQPANMFEREVKSAMRRWRYE
QGRPGTGVTMTIKFRLNGVEIN

Sequences:

>Translated_262_residues
MHLKSEHHFSTETTMSAMTLDLPRRFPWPTLLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQP
VVEPVVEPEPEPEPEVAPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENNNTAPARTAP
STSTAAAKPTVTAPSGPRAISRVQPSYPARAQALRIEGTVRVKFDVSPDGRIDNLQILSAQPANMFEREVKSAMRRWRYE
QGRPGTGVTMTIKFRLNGVEIN
>Mature_262_residues
MHLKSEHHFSTETTMSAMTLDLPRRFPWPTLLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQP
VVEPVVEPEPEPEPEVAPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENNNTAPARTAP
STSTAAAKPTVTAPSGPRAISRVQPSYPARAQALRIEGTVRVKFDVSPDGRIDNLQILSAQPANMFEREVKSAMRRWRYE
QGRPGTGVTMTIKFRLNGVEIN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

Organism=Escherichia coli, GI1787505, Length=242, Percent_Identity=67.3553719008264, Blast_Score=264, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28710; Mature: 28710

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLKSEHHFSTETTMSAMTLDLPRRFPWPTLLSVAIHGAVVAGLLYTSVHQVIEQPSPTQ
CCCCCCCCCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PIEITMVAPADLEPPPAAQPVVEPVVEPEPEPEPEVAPEPPKEAPVVIHKPEPKPKPKPK
CEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PKPKPEKKVEQPKREVKPAAEPRPASPFENNNTAPARTAPSTSTAAAKPTVTAPSGPRAI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
SRVQPSYPARAQALRIEGTVRVKFDVSPDGRIDNLQILSAQPANMFEREVKSAMRRWRYE
HHCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
QGRPGTGVTMTIKFRLNGVEIN
CCCCCCCEEEEEEEEEECEEEC
>Mature Secondary Structure
MHLKSEHHFSTETTMSAMTLDLPRRFPWPTLLSVAIHGAVVAGLLYTSVHQVIEQPSPTQ
CCCCCCCCCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PIEITMVAPADLEPPPAAQPVVEPVVEPEPEPEPEVAPEPPKEAPVVIHKPEPKPKPKPK
CEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PKPKPEKKVEQPKREVKPAAEPRPASPFENNNTAPARTAPSTSTAAAKPTVTAPSGPRAI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
SRVQPSYPARAQALRIEGTVRVKFDVSPDGRIDNLQILSAQPANMFEREVKSAMRRWRYE
HHCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
QGRPGTGVTMTIKFRLNGVEIN
CCCCCCCEEEEEEEEEECEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8370545 [H]