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The map label for this gene is cse2

Identifier: 238895129

GI number: 238895129

Start: 3006224

End: 3006790

Strand: Reverse

Name: cse2

Synonym: KP1_3169

Alternate gene names: NA

Gene position: 3006790-3006224 (Counterclockwise)

Preceding gene: 238895130

Following gene: 238895128

Centisome position: 57.29

GC content: 59.26

Gene sequence:

>567_bases
ATGGATCAGGTTCCTGCAGACGTTACCGCCGAAAGCGCCGGTAACGAATCGCCTGCCAAACGATTTGTCGGTTACGTGAT
TGAGCGTATCGCGAAAGACAATGGCTTTGCCGCCCGCCTTAAACGAGCGGATAACCCGGCGACCGAGTATCAGAGCTGGG
AAATCCTGGCGGGGTTTGGCATTGACCTGGAAAAAGAGTGGCAACGCCTGCCGTACTGCGTCATTGGCGCCGCGCTGGCA
AAGGCGAAACCGGCCAGCAATGGCACAATCACTCTGGGGGCCGCCATTGCCGGTTGTTATCCCGAAGGCAATCAGTCTGA
ACAGGCGAAAGCTCGCCTGCGACGGCTGTTGGCCTGTACTTCGACCAGCGAAGCGTGCCGTATTTTGCGCCCGTTGTTGG
CATTAATGGCCAGCCGCAGTGTGACGCCGGATTTCGCAGGGCTACTCAACGAACTGCAGTGGTTCTCCGGCAGCAGTCGC
GAACGGATCCGCGCCCGCTGGGCGCAGGAATTCTATCGTCGTGCCGGTGAGGCTGCCGGGAGTGAGGCGAGGAATTCACA
TGACTGA

Upstream 100 bases:

>100_bases
ATCAGCTCTGTCCCGCCGACAGTGCCCGTCAATTAGATGCCTGGGCGCTGGCCCGGCCTAATTTTTCCCAATATCTCACC
CTCGATTAAGGAGGATCATC

Downstream 100 bases:

>100_bases
CCTCTTTGCGAGTGCTTTACATCTCGATCGCGCTGCGGTGAAAGCGCTGAAAATAAGCGATGCCTACTCCCTACACCGGG
TGGTGTACAGCCTGTTTGCT

Product: crispr-associated Cse2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse2 Family Protein; Crispr-Associated Cse2 Family Protein

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDQVPADVTAESAGNESPAKRFVGYVIERIAKDNGFAARLKRADNPATEYQSWEILAGFGIDLEKEWQRLPYCVIGAALA
KAKPASNGTITLGAAIAGCYPEGNQSEQAKARLRRLLACTSTSEACRILRPLLALMASRSVTPDFAGLLNELQWFSGSSR
ERIRARWAQEFYRRAGEAAGSEARNSHD

Sequences:

>Translated_188_residues
MDQVPADVTAESAGNESPAKRFVGYVIERIAKDNGFAARLKRADNPATEYQSWEILAGFGIDLEKEWQRLPYCVIGAALA
KAKPASNGTITLGAAIAGCYPEGNQSEQAKARLRRLLACTSTSEACRILRPLLALMASRSVTPDFAGLLNELQWFSGSSR
ERIRARWAQEFYRRAGEAAGSEARNSHD
>Mature_188_residues
MDQVPADVTAESAGNESPAKRFVGYVIERIAKDNGFAARLKRADNPATEYQSWEILAGFGIDLEKEWQRLPYCVIGAALA
KAKPASNGTITLGAAIAGCYPEGNQSEQAKARLRRLLACTSTSEACRILRPLLALMASRSVTPDFAGLLNELQWFSGSSR
ERIRARWAQEFYRRAGEAAGSEARNSHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20550; Mature: 20550

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQVPADVTAESAGNESPAKRFVGYVIERIAKDNGFAARLKRADNPATEYQSWEILAGFG
CCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCHHEEECCC
IDLEKEWQRLPYCVIGAALAKAKPASNGTITLGAAIAGCYPEGNQSEQAKARLRRLLACT
CCHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHC
STSEACRILRPLLALMASRSVTPDFAGLLNELQWFSGSSRERIRARWAQEFYRRAGEAAG
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
SEARNSHD
CCCCCCCC
>Mature Secondary Structure
MDQVPADVTAESAGNESPAKRFVGYVIERIAKDNGFAARLKRADNPATEYQSWEILAGFG
CCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCHHEEECCC
IDLEKEWQRLPYCVIGAALAKAKPASNGTITLGAAIAGCYPEGNQSEQAKARLRRLLACT
CCHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHC
STSEACRILRPLLALMASRSVTPDFAGLLNELQWFSGSSRERIRARWAQEFYRRAGEAAG
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
SEARNSHD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA