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The map label for this gene is cse1

Identifier: 238895130

GI number: 238895130

Start: 3006802

End: 3008325

Strand: Reverse

Name: cse1

Synonym: KP1_3170

Alternate gene names: NA

Gene position: 3008325-3006802 (Counterclockwise)

Preceding gene: 238895131

Following gene: 238895129

Centisome position: 57.32

GC content: 50.07

Gene sequence:

>1524_bases
ATGGAGAACCGCTTCAATTTGATTGATGAACCCTGGATTGCGGTCGTGGATGTGGGGTTGGTCAGTTTAACCGATATTTT
CAGCCAGCCGGAATTACGCGCTTTAGGTGGGAATCCGGTAGAAAAAATCGCGCTCACTAAATTGCTACTCGCCATCGCCC
AGGCAGCAGCGACGCCGACAGATGATAGCGACTGGCAGCAGATGGGCTGGCAGGGAATGGCCCATTGCTGCCTGCAGTAC
CTTGCTAAATGGCATGACCGTTTTTATCTGTATGGCGAAAAGCCGTTCTTACAGATGCCCGCTATTCAGGCCGCGGAATG
TAAGTCATTGGGAGTATTATCACCGGAGGTGAGTACCGGCAATACCACCGTTTTGACCGAAAGTCAGCAACAGCAGCAAT
TAACTGATGCAGACAAAGCGCTAGCTATTGTTATGCAAATGGGCTTTGGGCTCGGAGGCAAGAAAACCGATAACTCTGTG
GTATTAACGCCGGGCTATCGGGGTAAACAAAACGACAAGGGAAAGCCGGGCAGTGGAAAGGCCGGGGTTTCTGTCGGGCA
TATGGGATTGTTACATTCGTTCTGGCAGGGGAATTCAATCGTACAGAGCATTTGGCTCAATTTGTTTACCGCTGAGGATA
TTACGCAGCTGGCGATGTATCCCACGCTGGGGACTGCTCCCTGGGAGCGAATGCCGACAGGGGAAGATGATGACATTGCG
CGCTCGTTGAAAGCGTCGTTGCTGGGCCGCTTGATCTCGATGGGTAAATTTTGTCTGTTAGCTGAGGACGGCATTCACTA
TAGCGATGGAATAAGCCATGCCGGTTATCTGGAGGGCAAAACCGACCCCTCGGTGTCCGTCGATTTTTCAGGAAAGAAAC
CAAAGGCGTTATGGGTTAATCCGGGTAAACGCCCCTGGCGCGAACTGACGTCGTTATTGCAGTTTATTGAGCAAGATAGC
CCCCGGGGATATGAAACCCGTCAGCTTAGCCTTCCTCTGAAGCGGATAACCCATCATGCGGAGCAGTTTGCGCTATGGTC
AGGCGGCTTAAGGGTGAGTAGTAATGCGGGGGAACAGTACGCTTCAGGGACCGATGATTATGTTCAGTCAGAAATATGGT
TGTCATCAGATTTAATCAATCACACATTTTTAGAGTATTTAAAATATGAAATGACGCAGCTTGATGCTGTGCAAAAACAG
CTTTGGGGTGCAGTTGTACGTTATTTTCGCCAGCTATCAGATATTGATAAATCAGCGACAGGGAAGGCTCAACCCTTTGT
GGCAAAGCAGGCCGAAAAAGCGACGACGATATTCTGGCAACTTTGTGAACGTCAGGCTCAGACCCTAATTAATGCTTGCT
TGAATTCCGGTGAAGACCATACCGCGCGTCTTCAGTTACGAAAAATTTTTGCCAGGTACGCCGGGCAGGTTTTTGATCAG
CTCTGTCCCGCCGACAGTGCCCGTCAATTAGATGCCTGGGCGCTGGCCCGGCCTAATTTTTCCCAATATCTCACCCTCGA
TTAA

Upstream 100 bases:

>100_bases
TGAGTTGAAGACACTGGATGGCCGGCCCGCAGGCGATAAATACACTCTCGAATATAGTGAATATCTTGGCTTCCGGGCCA
TTTCCAAAAAGGAATAAACC

Downstream 100 bases:

>100_bases
GGAGGATCATCATGGATCAGGTTCCTGCAGACGTTACCGCCGAAAGCGCCGGTAACGAATCGCCTGCCAAACGATTTGTC
GGTTACGTGATTGAGCGTAT

Product: crispr-associated Cse1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; Crispr-Associated Cse1 Family Protein

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MENRFNLIDEPWIAVVDVGLVSLTDIFSQPELRALGGNPVEKIALTKLLLAIAQAAATPTDDSDWQQMGWQGMAHCCLQY
LAKWHDRFYLYGEKPFLQMPAIQAAECKSLGVLSPEVSTGNTTVLTESQQQQQLTDADKALAIVMQMGFGLGGKKTDNSV
VLTPGYRGKQNDKGKPGSGKAGVSVGHMGLLHSFWQGNSIVQSIWLNLFTAEDITQLAMYPTLGTAPWERMPTGEDDDIA
RSLKASLLGRLISMGKFCLLAEDGIHYSDGISHAGYLEGKTDPSVSVDFSGKKPKALWVNPGKRPWRELTSLLQFIEQDS
PRGYETRQLSLPLKRITHHAEQFALWSGGLRVSSNAGEQYASGTDDYVQSEIWLSSDLINHTFLEYLKYEMTQLDAVQKQ
LWGAVVRYFRQLSDIDKSATGKAQPFVAKQAEKATTIFWQLCERQAQTLINACLNSGEDHTARLQLRKIFARYAGQVFDQ
LCPADSARQLDAWALARPNFSQYLTLD

Sequences:

>Translated_507_residues
MENRFNLIDEPWIAVVDVGLVSLTDIFSQPELRALGGNPVEKIALTKLLLAIAQAAATPTDDSDWQQMGWQGMAHCCLQY
LAKWHDRFYLYGEKPFLQMPAIQAAECKSLGVLSPEVSTGNTTVLTESQQQQQLTDADKALAIVMQMGFGLGGKKTDNSV
VLTPGYRGKQNDKGKPGSGKAGVSVGHMGLLHSFWQGNSIVQSIWLNLFTAEDITQLAMYPTLGTAPWERMPTGEDDDIA
RSLKASLLGRLISMGKFCLLAEDGIHYSDGISHAGYLEGKTDPSVSVDFSGKKPKALWVNPGKRPWRELTSLLQFIEQDS
PRGYETRQLSLPLKRITHHAEQFALWSGGLRVSSNAGEQYASGTDDYVQSEIWLSSDLINHTFLEYLKYEMTQLDAVQKQ
LWGAVVRYFRQLSDIDKSATGKAQPFVAKQAEKATTIFWQLCERQAQTLINACLNSGEDHTARLQLRKIFARYAGQVFDQ
LCPADSARQLDAWALARPNFSQYLTLD
>Mature_507_residues
MENRFNLIDEPWIAVVDVGLVSLTDIFSQPELRALGGNPVEKIALTKLLLAIAQAAATPTDDSDWQQMGWQGMAHCCLQY
LAKWHDRFYLYGEKPFLQMPAIQAAECKSLGVLSPEVSTGNTTVLTESQQQQQLTDADKALAIVMQMGFGLGGKKTDNSV
VLTPGYRGKQNDKGKPGSGKAGVSVGHMGLLHSFWQGNSIVQSIWLNLFTAEDITQLAMYPTLGTAPWERMPTGEDDDIA
RSLKASLLGRLISMGKFCLLAEDGIHYSDGISHAGYLEGKTDPSVSVDFSGKKPKALWVNPGKRPWRELTSLLQFIEQDS
PRGYETRQLSLPLKRITHHAEQFALWSGGLRVSSNAGEQYASGTDDYVQSEIWLSSDLINHTFLEYLKYEMTQLDAVQKQ
LWGAVVRYFRQLSDIDKSATGKAQPFVAKQAEKATTIFWQLCERQAQTLINACLNSGEDHTARLQLRKIFARYAGQVFDQ
LCPADSARQLDAWALARPNFSQYLTLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56336; Mature: 56336

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRFNLIDEPWIAVVDVGLVSLTDIFSQPELRALGGNPVEKIALTKLLLAIAQAAATPT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
DDSDWQQMGWQGMAHCCLQYLAKWHDRFYLYGEKPFLQMPAIQAAECKSLGVLSPEVSTG
CCCHHHHHCHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCC
NTTVLTESQQQQQLTDADKALAIVMQMGFGLGGKKTDNSVVLTPGYRGKQNDKGKPGSGK
CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
AGVSVGHMGLLHSFWQGNSIVQSIWLNLFTAEDITQLAMYPTLGTAPWERMPTGEDDDIA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
RSLKASLLGRLISMGKFCLLAEDGIHYSDGISHAGYLEGKTDPSVSVDFSGKKPKALWVN
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEC
PGKRPWRELTSLLQFIEQDSPRGYETRQLSLPLKRITHHAEQFALWSGGLRVSSNAGEQY
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCHHH
ASGTDDYVQSEIWLSSDLINHTFLEYLKYEMTQLDAVQKQLWGAVVRYFRQLSDIDKSAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GKAQPFVAKQAEKATTIFWQLCERQAQTLINACLNSGEDHTARLQLRKIFARYAGQVFDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LCPADSARQLDAWALARPNFSQYLTLD
HCCCCCCHHCCHHHCCCCCCCCCEECC
>Mature Secondary Structure
MENRFNLIDEPWIAVVDVGLVSLTDIFSQPELRALGGNPVEKIALTKLLLAIAQAAATPT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
DDSDWQQMGWQGMAHCCLQYLAKWHDRFYLYGEKPFLQMPAIQAAECKSLGVLSPEVSTG
CCCHHHHHCHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCC
NTTVLTESQQQQQLTDADKALAIVMQMGFGLGGKKTDNSVVLTPGYRGKQNDKGKPGSGK
CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
AGVSVGHMGLLHSFWQGNSIVQSIWLNLFTAEDITQLAMYPTLGTAPWERMPTGEDDDIA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
RSLKASLLGRLISMGKFCLLAEDGIHYSDGISHAGYLEGKTDPSVSVDFSGKKPKALWVN
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEC
PGKRPWRELTSLLQFIEQDSPRGYETRQLSLPLKRITHHAEQFALWSGGLRVSSNAGEQY
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCHHH
ASGTDDYVQSEIWLSSDLINHTFLEYLKYEMTQLDAVQKQLWGAVVRYFRQLSDIDKSAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GKAQPFVAKQAEKATTIFWQLCERQAQTLINACLNSGEDHTARLQLRKIFARYAGQVFDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LCPADSARQLDAWALARPNFSQYLTLD
HCCCCCCHHCCHHHCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA