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The map label for this gene is cse4 [H]

Identifier: 238895127

GI number: 238895127

Start: 3004520

End: 3005554

Strand: Reverse

Name: cse4 [H]

Synonym: KP1_3167

Alternate gene names: 238895127

Gene position: 3005554-3004520 (Counterclockwise)

Preceding gene: 238895128

Following gene: 238895126

Centisome position: 57.26

GC content: 55.36

Gene sequence:

>1035_bases
ATGACTACCCCGTTCAGAAACACCCGTATTGAGTTTCATATTCTGCAGTCTTTCCCGGTGACCTGCCTTAACCGCGATGA
CGTGGGCGCCCCCAAGTCCGCCATCGTTGGCGGTGTGTCGCGCGCCAGAGTGTCATCGCAGTGCTGGAAGCGCCAGGTGC
GTCTGGCGCTGCCTGATTTTGGTATTCGTCTCGGGGTGCGTAGTAAAAAAACTGCCTCACTGCTGGCCAACGCCTGTCGC
GCACTGGGAGCGAGCGAAGAACAGGCCACCGGATGCGGTGAAGCGATGGCCGCTTTTTTCTCCGATGATACCCTGCTGTT
TCTCAGCGAGGCTGAGGCCGCCGCATTTGCCGCTTATGCGCAGGGAAAAGATTTTGACGCCGCCAGCCTGAAAGACAAAG
AGCTGGTCAAAGTCGCCAAAAAGGTGGTTAACAATACCCTGGATGCCCTGGATATTGCGCTTTTCGGGCGCATGGTGGCC
AAAGCGGCGGATATGAACGTTGAGGCGGCGGCATCGTTCGCGCATGCCATTTCCACCCATAAAGTGAGTAATGAGATCGA
GTTTTTTACCGCCGTGGATGACTGTAAAACGGAGGATGAAAGCGGTTCGGCACATATGGGCAGCCTGGAGTTTAATTCGG
CGACCTACTATCGCTATGTCAGCTTGGATCTCGGGCAACTGGCGCAGACGTTGGGTGAGGACGCCGATATGAAAACCGCC
GTCGCCGCTTTTGTTAAGGCACTCTATGTCGCCGTCCCCTCAGCCCGACAGACAACGCAGTCCGGGGCCTGCCCGTGGGA
ATATGCCCGCGTGTTACTGCGTAAAGGTCAGGGTCTGCAGGCTTCATTCGAGCAGCCAGTTAAGAGTCAGGGTGAAGGCT
TCTTATCTCCCAGTAAAGCGGCGCTCAAAAACTGGTTGCATACAAAAGAAAAACTCTCTGGCTCCTTGTTCGGCAAACAA
GGCGATTATGAGTGGGGTGAGGACCTCGACTACAGCATTGACCGCCTGATCGCTGACTTACAGTCACATCTGTAA

Upstream 100 bases:

>100_bases
TTGGTAAAGGGCGAGCCTTTGGCTGCGGCCTGCTGCAGATTGTGCCCGTTGTTGATGCGCTTTTTTCCTGATGGTTTAAC
AATTTATTAAGGATAATCTT

Downstream 100 bases:

>100_bases
TGGACGGTGGAGATGAGACAAACTACGCAATATATGCTGCTGTGGCTTGAAGGGCCGCTGCAGTCCTGGGGGGGCGATTC
AAAGTTCGGTGTGCGCGATA

Product: crispr-associated Cse4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTTPFRNTRIEFHILQSFPVTCLNRDDVGAPKSAIVGGVSRARVSSQCWKRQVRLALPDFGIRLGVRSKKTASLLANACR
ALGASEEQATGCGEAMAAFFSDDTLLFLSEAEAAAFAAYAQGKDFDAASLKDKELVKVAKKVVNNTLDALDIALFGRMVA
KAADMNVEAAASFAHAISTHKVSNEIEFFTAVDDCKTEDESGSAHMGSLEFNSATYYRYVSLDLGQLAQTLGEDADMKTA
VAAFVKALYVAVPSARQTTQSGACPWEYARVLLRKGQGLQASFEQPVKSQGEGFLSPSKAALKNWLHTKEKLSGSLFGKQ
GDYEWGEDLDYSIDRLIADLQSHL

Sequences:

>Translated_344_residues
MTTPFRNTRIEFHILQSFPVTCLNRDDVGAPKSAIVGGVSRARVSSQCWKRQVRLALPDFGIRLGVRSKKTASLLANACR
ALGASEEQATGCGEAMAAFFSDDTLLFLSEAEAAAFAAYAQGKDFDAASLKDKELVKVAKKVVNNTLDALDIALFGRMVA
KAADMNVEAAASFAHAISTHKVSNEIEFFTAVDDCKTEDESGSAHMGSLEFNSATYYRYVSLDLGQLAQTLGEDADMKTA
VAAFVKALYVAVPSARQTTQSGACPWEYARVLLRKGQGLQASFEQPVKSQGEGFLSPSKAALKNWLHTKEKLSGSLFGKQ
GDYEWGEDLDYSIDRLIADLQSHL
>Mature_343_residues
TTPFRNTRIEFHILQSFPVTCLNRDDVGAPKSAIVGGVSRARVSSQCWKRQVRLALPDFGIRLGVRSKKTASLLANACRA
LGASEEQATGCGEAMAAFFSDDTLLFLSEAEAAAFAAYAQGKDFDAASLKDKELVKVAKKVVNNTLDALDIALFGRMVAK
AADMNVEAAASFAHAISTHKVSNEIEFFTAVDDCKTEDESGSAHMGSLEFNSATYYRYVSLDLGQLAQTLGEDADMKTAV
AAFVKALYVAVPSARQTTQSGACPWEYARVLLRKGQGLQASFEQPVKSQGEGFLSPSKAALKNWLHTKEKLSGSLFGKQG
DYEWGEDLDYSIDRLIADLQSHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=329, Percent_Identity=34.9544072948328, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 37262; Mature: 37131

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPFRNTRIEFHILQSFPVTCLNRDDVGAPKSAIVGGVSRARVSSQCWKRQVRLALPDF
CCCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
GIRLGVRSKKTASLLANACRALGASEEQATGCGEAMAAFFSDDTLLFLSEAEAAAFAAYA
CEEECCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHH
QGKDFDAASLKDKELVKVAKKVVNNTLDALDIALFGRMVAKAADMNVEAAASFAHAISTH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KVSNEIEFFTAVDDCKTEDESGSAHMGSLEFNSATYYRYVSLDLGQLAQTLGEDADMKTA
HHCCCCEEEEEHHHHCCCCCCCCCEECCEEECCCEEEEEEECCHHHHHHHHCCCCCHHHH
VAAFVKALYVAVPSARQTTQSGACPWEYARVLLRKGQGLQASFEQPVKSQGEGFLSPSKA
HHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHCHHHHCCCCCCCCCHH
ALKNWLHTKEKLSGSLFGKQGDYEWGEDLDYSIDRLIADLQSHL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPFRNTRIEFHILQSFPVTCLNRDDVGAPKSAIVGGVSRARVSSQCWKRQVRLALPDF
CCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
GIRLGVRSKKTASLLANACRALGASEEQATGCGEAMAAFFSDDTLLFLSEAEAAAFAAYA
CEEECCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHH
QGKDFDAASLKDKELVKVAKKVVNNTLDALDIALFGRMVAKAADMNVEAAASFAHAISTH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KVSNEIEFFTAVDDCKTEDESGSAHMGSLEFNSATYYRYVSLDLGQLAQTLGEDADMKTA
HHCCCCEEEEEHHHHCCCCCCCCCEECCEEECCCEEEEEEECCHHHHHHHHCCCCCHHHH
VAAFVKALYVAVPSARQTTQSGACPWEYARVLLRKGQGLQASFEQPVKSQGEGFLSPSKA
HHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHCHHHHCCCCCCCCCHH
ALKNWLHTKEKLSGSLFGKQGDYEWGEDLDYSIDRLIADLQSHL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]