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The map label for this gene is cas5e [C]

Identifier: 238895126

GI number: 238895126

Start: 3003791

End: 3004513

Strand: Reverse

Name: cas5e [C]

Synonym: KP1_3166

Alternate gene names: 238895126

Gene position: 3004513-3003791 (Counterclockwise)

Preceding gene: 238895127

Following gene: 238895125

Centisome position: 57.24

GC content: 57.68

Gene sequence:

>723_bases
GTGGAGATGAGACAAACTACGCAATATATGCTGCTGTGGCTTGAAGGGCCGCTGCAGTCCTGGGGGGGCGATTCAAAGTT
CGGTGTGCGCGATACGCTGAATTTCCCGACTCGCTCGGGCATTCTGGGGCTGATTTGCTGTGCACGAGGCGCCGCGGGGC
CAGAGGTCGAGTGGCTGGCGGAGATGAATAACCTGCCGATGGAGGTTCGCGCCTACGCCCGAACCGACAAGGAGGGCCAG
CCGCTCCTGCGCGAGCCGACATTGTGCGATTTCCAGATGGTTGGCAGCGGATATGACGACAGCGATCCGTGGCAAAGTCT
GCTGATCCCTAAAACATCCGATGGAAAGAAAGCCGTAGGGGGTGGAACGAAAATGACCTACCGCCACTATCTCCAGGATG
CCGTATTCGCCGTGGTAATGGGACTTGGCAGCCAGCAAGCCGAGTCGTTACCAGAGGCGCTACAAAATCCGGTATGGGAT
TTATATCTCGGTCGTAAAAGCTGCGTGCCCAGCGAGCTGATCTATCAGGGCATCTATGACAGCGCAGAAGCGGCATGGCA
GCAGGCCAGGACATTAGCTGAGAGTAAGCGGCGCACGCTGAGTTACAAGGTCATTGAAGGGGAAGGGGATGGCGATGTCA
TCACGCTTAATGATGTCCCGGTGCAGTTCGGCCGGCATAAGCGTTACCGGGATCGTCAGGTGACCGTGCTGGAGTGCGGC
TAA

Upstream 100 bases:

>100_bases
CTCCTTGTTCGGCAAACAAGGCGATTATGAGTGGGGTGAGGACCTCGACTACAGCATTGACCGCCTGATCGCTGACTTAC
AGTCACATCTGTAATGGACG

Downstream 100 bases:

>100_bases
TGGCCCAGGGGGAGAGGCTGTTTGTCAAAGTTACCCGCGAACTCCTGCCTCAGGTAAAAGATAAATATCCTTTTCTCTAT
CTTGAGCGCGGGCGGCTGGA

Product: CRISPR-associated Cse5e family protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Protein; CRISPR-Associated Cas5e Family Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Protein Cas5e Family; CRISPR-Associated Family Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Protein CT; CRISPR-Associated Ecoli Subtype

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MEMRQTTQYMLLWLEGPLQSWGGDSKFGVRDTLNFPTRSGILGLICCARGAAGPEVEWLAEMNNLPMEVRAYARTDKEGQ
PLLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVGGGTKMTYRHYLQDAVFAVVMGLGSQQAESLPEALQNPVWD
LYLGRKSCVPSELIYQGIYDSAEAAWQQARTLAESKRRTLSYKVIEGEGDGDVITLNDVPVQFGRHKRYRDRQVTVLECG

Sequences:

>Translated_240_residues
MEMRQTTQYMLLWLEGPLQSWGGDSKFGVRDTLNFPTRSGILGLICCARGAAGPEVEWLAEMNNLPMEVRAYARTDKEGQ
PLLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVGGGTKMTYRHYLQDAVFAVVMGLGSQQAESLPEALQNPVWD
LYLGRKSCVPSELIYQGIYDSAEAAWQQARTLAESKRRTLSYKVIEGEGDGDVITLNDVPVQFGRHKRYRDRQVTVLECG
>Mature_240_residues
MEMRQTTQYMLLWLEGPLQSWGGDSKFGVRDTLNFPTRSGILGLICCARGAAGPEVEWLAEMNNLPMEVRAYARTDKEGQ
PLLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVGGGTKMTYRHYLQDAVFAVVMGLGSQQAESLPEALQNPVWD
LYLGRKSCVPSELIYQGIYDSAEAAWQQARTLAESKRRTLSYKVIEGEGDGDVITLNDVPVQFGRHKRYRDRQVTVLECG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26821; Mature: 26821

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMRQTTQYMLLWLEGPLQSWGGDSKFGVRDTLNFPTRSGILGLICCARGAAGPEVEWLA
CCCHHHHEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH
EMNNLPMEVRAYARTDKEGQPLLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVG
HHCCCCCEEHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHEECCCCCCCCCCCC
GGTKMTYRHYLQDAVFAVVMGLGSQQAESLPEALQNPVWDLYLGRKSCVPSELIYQGIYD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
SAEAAWQQARTLAESKRRTLSYKVIEGEGDGDVITLNDVPVQFGRHKRYRDRQVTVLECG
HHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEECCCHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MEMRQTTQYMLLWLEGPLQSWGGDSKFGVRDTLNFPTRSGILGLICCARGAAGPEVEWLA
CCCHHHHEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH
EMNNLPMEVRAYARTDKEGQPLLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVG
HHCCCCCEEHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHEECCCCCCCCCCCC
GGTKMTYRHYLQDAVFAVVMGLGSQQAESLPEALQNPVWDLYLGRKSCVPSELIYQGIYD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
SAEAAWQQARTLAESKRRTLSYKVIEGEGDGDVITLNDVPVQFGRHKRYRDRQVTVLECG
HHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEECCCHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA