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The map label for this gene is lpsJ [H]

Identifier: 238895094

GI number: 238895094

Start: 2971879

End: 2972571

Strand: Direct

Name: lpsJ [H]

Synonym: KP1_3130

Alternate gene names: 238895094

Gene position: 2971879-2972571 (Clockwise)

Preceding gene: 238895093

Following gene: 238895095

Centisome position: 56.62

GC content: 62.91

Gene sequence:

>693_bases
TTGAACAGCGCACCCTGCGCGCCGGAGGGCACTGAGATGCTGACCCGTGAACAAATGGCGATGCGCGTCGCCCAGGAGCT
GCGCGACGGCGACTACGTCAACCTCGGGATCGGTATCCCGACGCTGGTGGCCAACTACATTCCCGCCGGCATTGAAGTGA
TGCTCCAGTCGGAGAACGGCCTGCTGGGGATGGGCGAATTTCCCGATGAGGAAACCATCGACGCCGACATGATTAACGCC
GGTAAACAAACCGTCACCGCGCAAACCGGGGCGGCGATCTTCGATTCCGCCCAGTCGTTCGCCATGATCCGCGGCGGCCA
CGTCGACCTGACCGTTCTTGGCGCCTTTGAGGTCGACGTCGCGGGCAACATCGCCTCATGGATGATCCCTGGAAAAATGG
TCAAGGGGATGGGCGGCGCCATGGACCTGGTGGCCGGCGCGCAGAACATCATCGTGGTGATGACCCACGCCTCAAAAAAC
GGCGAATCCAAACTGCTGCCGCAGTGCACCCTGCCGCTCACCGGCGTGGGCTGTATTCGCCGGGTACTCACCGATCTGGC
CCTGCTGGAGATTGTCGACGGCGCGTTTGTCCTGCGCGAAGTGGCCCCGGGGGTCAGCCCCGACGAGGTGATACGTAAAA
CGGCGGGACGGCTGATCGTCGCCGACGACGTGCGCGAAATGCGCTTCAGTTAA

Upstream 100 bases:

>100_bases
GTGGAAGAGATTGTGCCGCCGGGCGAACTGCCCCCCTCCGCCATCCATACTCCGGGGATCTATGTCGACCGGCTGATCGT
CGGGCAATTCGAAAAACGTA

Downstream 100 bases:

>100_bases
GGAGAGATCATGACCGATATTGCCATTGTTGCTGCCGTACGCACCCCGATAGGCAGCTTTCGCGGCGCCTTCGCCCCTCT
TTCCGCCGTCGACCTCGGCG

Product: putative acetyl-CoA:acetoacetyl-CoA transferase beta subunit

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNSAPCAPEGTEMLTREQMAMRVAQELRDGDYVNLGIGIPTLVANYIPAGIEVMLQSENGLLGMGEFPDEETIDADMINA
GKQTVTAQTGAAIFDSAQSFAMIRGGHVDLTVLGAFEVDVAGNIASWMIPGKMVKGMGGAMDLVAGAQNIIVVMTHASKN
GESKLLPQCTLPLTGVGCIRRVLTDLALLEIVDGAFVLREVAPGVSPDEVIRKTAGRLIVADDVREMRFS

Sequences:

>Translated_230_residues
MNSAPCAPEGTEMLTREQMAMRVAQELRDGDYVNLGIGIPTLVANYIPAGIEVMLQSENGLLGMGEFPDEETIDADMINA
GKQTVTAQTGAAIFDSAQSFAMIRGGHVDLTVLGAFEVDVAGNIASWMIPGKMVKGMGGAMDLVAGAQNIIVVMTHASKN
GESKLLPQCTLPLTGVGCIRRVLTDLALLEIVDGAFVLREVAPGVSPDEVIRKTAGRLIVADDVREMRFS
>Mature_230_residues
MNSAPCAPEGTEMLTREQMAMRVAQELRDGDYVNLGIGIPTLVANYIPAGIEVMLQSENGLLGMGEFPDEETIDADMINA
GKQTVTAQTGAAIFDSAQSFAMIRGGHVDLTVLGAFEVDVAGNIASWMIPGKMVKGMGGAMDLVAGAQNIIVVMTHASKN
GESKLLPQCTLPLTGVGCIRRVLTDLALLEIVDGAFVLREVAPGVSPDEVIRKTAGRLIVADDVREMRFS

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=215, Percent_Identity=49.7674418604651, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI11545841, Length=221, Percent_Identity=47.0588235294118, Blast_Score=211, Evalue=4e-55,
Organism=Escherichia coli, GI1788552, Length=216, Percent_Identity=50.9259259259259, Blast_Score=222, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17531517, Length=215, Percent_Identity=52.093023255814, Blast_Score=223, Evalue=7e-59,
Organism=Drosophila melanogaster, GI21358325, Length=214, Percent_Identity=52.3364485981308, Blast_Score=231, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24655794, Length=214, Percent_Identity=52.3364485981308, Blast_Score=231, Evalue=3e-61,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 24335; Mature: 24335

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS01274 COA_TRANSF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAPCAPEGTEMLTREQMAMRVAQELRDGDYVNLGIGIPTLVANYIPAGIEVMLQSENG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCC
LLGMGEFPDEETIDADMINAGKQTVTAQTGAAIFDSAQSFAMIRGGHVDLTVLGAFEVDV
EEECCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHEEECCCEEEEEEEEEEEEE
AGNIASWMIPGKMVKGMGGAMDLVAGAQNIIVVMTHASKNGESKLLPQCTLPLTGVGCIR
CCCHHHHCCCHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
RVLTDLALLEIVDGAFVLREVAPGVSPDEVIRKTAGRLIVADDVREMRFS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCHHHHCCC
>Mature Secondary Structure
MNSAPCAPEGTEMLTREQMAMRVAQELRDGDYVNLGIGIPTLVANYIPAGIEVMLQSENG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCC
LLGMGEFPDEETIDADMINAGKQTVTAQTGAAIFDSAQSFAMIRGGHVDLTVLGAFEVDV
EEECCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHEEECCCEEEEEEEEEEEEE
AGNIASWMIPGKMVKGMGGAMDLVAGAQNIIVVMTHASKNGESKLLPQCTLPLTGVGCIR
CCCHHHHCCCHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
RVLTDLALLEIVDGAFVLREVAPGVSPDEVIRKTAGRLIVADDVREMRFS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]