Click here to switch to the map view.

The map label for this gene is ybjX [H]

Identifier: 238895089

GI number: 238895089

Start: 2968790

End: 2969698

Strand: Reverse

Name: ybjX [H]

Synonym: KP1_3125

Alternate gene names: 238895089

Gene position: 2969698-2968790 (Counterclockwise)

Preceding gene: 238895092

Following gene: 238895088

Centisome position: 56.58

GC content: 48.18

Gene sequence:

>909_bases
ATGGAACATACTGTTGCAGGCGCCATCAAAGAATGGCGTAAACATAATAAAGTGATCGGTCAGGTCAAAATAAGCTATAA
AAAAATTTTACGAAAATGCAGAGAGCTCTCGCTCGCAGGAGGTAAATACAGAGAATATCAAGGACTTTGTGCGAAATATC
AGTGCGCGCGGTTGACCGCGGTGACCAAAGGACTGGTGCCTTTTGAGGATAAACCGTTTAAAGCGTATCTCAATAAACGG
CTGTCAAAACGACGCAAACTGGATATTGCCCATGGTTCACTGAATTTCATCGAGAAAACGTTTCACCCTGATATCCTGCC
GCAGCTCTACAATGTCGCGGATTTTGGCCGCGAGATGTTTTCTATTCCCTTGAAAAATGGCGATAAGCTTGACGTTAAGC
TGCTGGCCTCGCCGTTTCAGGAGGAAGGGGAGCTGATGCTGCAGCTGTTTCTTGGCGACCGGCGCGTCTATAGCGTCTGT
TTTTCCTGCACCGACGATGGCCGCGCTTATATCGGCGGCATCCAGGGCGGGAAAGATATCACCAATGACGAAGTGAAGGT
GCTGACTAAAGAGCTGCATGGCGCGCGGCCGAAAAATATCATCATGAGCGTGCTGTATGGTTTGCTGCGATATTTCAACA
TCTCCACGGTCTACGCCATCGATTCTGATTACCACGTGAAAAGCGATCTGGTGAAAGCCAGTTATTCATCGCTGTGGCTG
GAAATGGGCGGTGAGAAACAGGCTCGCGGCTGGTATAAACTGCCGGCGCAAGAGATCAAAAAGAGTATTGAAGAGGTGAA
AAGTAAGCACCGGAGCCAGTTTATTAAGCGCGAAGGTCTTAAAGAGCTGATTCAGATTAATATGGCGAATGCCCTGCAGC
AAATTACCTTGCCTGCGCGGGTGAATTAA

Upstream 100 bases:

>100_bases
AATATTAAATGAAAGGACAACGAAGGAGTAATTAAGCGTTGACGAAACGCTTTTATGTTAATATGGCCGCGATTATGGAT
GAATCTATGGATCTTAATCA

Downstream 100 bases:

>100_bases
CGCCACTCACACGTCAGGCGGGCAGCAGGGGGCTGCTGCCCGTCTGACGATATCCTTTCTTCACTGGCGCGTTTCCAGCC
AGATTTCATCCTATCCCAGG

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEHTVAGAIKEWRKHNKVIGQVKISYKKILRKCRELSLAGGKYREYQGLCAKYQCARLTAVTKGLVPFEDKPFKAYLNKR
LSKRRKLDIAHGSLNFIEKTFHPDILPQLYNVADFGREMFSIPLKNGDKLDVKLLASPFQEEGELMLQLFLGDRRVYSVC
FSCTDDGRAYIGGIQGGKDITNDEVKVLTKELHGARPKNIIMSVLYGLLRYFNISTVYAIDSDYHVKSDLVKASYSSLWL
EMGGEKQARGWYKLPAQEIKKSIEEVKSKHRSQFIKREGLKELIQINMANALQQITLPARVN

Sequences:

>Translated_302_residues
MEHTVAGAIKEWRKHNKVIGQVKISYKKILRKCRELSLAGGKYREYQGLCAKYQCARLTAVTKGLVPFEDKPFKAYLNKR
LSKRRKLDIAHGSLNFIEKTFHPDILPQLYNVADFGREMFSIPLKNGDKLDVKLLASPFQEEGELMLQLFLGDRRVYSVC
FSCTDDGRAYIGGIQGGKDITNDEVKVLTKELHGARPKNIIMSVLYGLLRYFNISTVYAIDSDYHVKSDLVKASYSSLWL
EMGGEKQARGWYKLPAQEIKKSIEEVKSKHRSQFIKREGLKELIQINMANALQQITLPARVN
>Mature_302_residues
MEHTVAGAIKEWRKHNKVIGQVKISYKKILRKCRELSLAGGKYREYQGLCAKYQCARLTAVTKGLVPFEDKPFKAYLNKR
LSKRRKLDIAHGSLNFIEKTFHPDILPQLYNVADFGREMFSIPLKNGDKLDVKLLASPFQEEGELMLQLFLGDRRVYSVC
FSCTDDGRAYIGGIQGGKDITNDEVKVLTKELHGARPKNIIMSVLYGLLRYFNISTVYAIDSDYHVKSDLVKASYSSLWL
EMGGEKQARGWYKLPAQEIKKSIEEVKSKHRSQFIKREGLKELIQINMANALQQITLPARVN

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=235, Percent_Identity=24.6808510638298, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 34523; Mature: 34523

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTVAGAIKEWRKHNKVIGQVKISYKKILRKCRELSLAGGKYREYQGLCAKYQCARLTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VTKGLVPFEDKPFKAYLNKRLSKRRKLDIAHGSLNFIEKTFHPDILPQLYNVADFGREMF
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SIPLKNGDKLDVKLLASPFQEEGELMLQLFLGDRRVYSVCFSCTDDGRAYIGGIQGGKDI
CCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHCCHHEEHHHHHCCCCCCEEEECCCCCCCC
TNDEVKVLTKELHGARPKNIIMSVLYGLLRYFNISTVYAIDSDYHVKSDLVKASYSSLWL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
EMGGEKQARGWYKLPAQEIKKSIEEVKSKHRSQFIKREGLKELIQINMANALQQITLPAR
HCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VN
CC
>Mature Secondary Structure
MEHTVAGAIKEWRKHNKVIGQVKISYKKILRKCRELSLAGGKYREYQGLCAKYQCARLTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VTKGLVPFEDKPFKAYLNKRLSKRRKLDIAHGSLNFIEKTFHPDILPQLYNVADFGREMF
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SIPLKNGDKLDVKLLASPFQEEGELMLQLFLGDRRVYSVCFSCTDDGRAYIGGIQGGKDI
CCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHCCHHEEHHHHHCCCCCCEEEECCCCCCCC
TNDEVKVLTKELHGARPKNIIMSVLYGLLRYFNISTVYAIDSDYHVKSDLVKASYSSLWL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
EMGGEKQARGWYKLPAQEIKKSIEEVKSKHRSQFIKREGLKELIQINMANALQQITLPAR
HCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]