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The map label for this gene is glcD [H]

Identifier: 238895086

GI number: 238895086

Start: 2966513

End: 2967934

Strand: Direct

Name: glcD [H]

Synonym: KP1_3121

Alternate gene names: 238895086

Gene position: 2966513-2967934 (Clockwise)

Preceding gene: 238895085

Following gene: 238895090

Centisome position: 56.52

GC content: 63.99

Gene sequence:

>1422_bases
ATGATGACTGATGAACAGCGTCAACACGCGGTCGCGGCGATCCAGCAGGCACTCCCGGCGCTGGAGTGGACCTTACAGCC
GGCGAAGATCAAACGGCTCTCCCGCGATTTTCACTGGTTCAGTCCGCTACTCACCGAGCAACTGGCGGGGAAACAGGCGG
ACGCGGTGGTTCGCCCGCGCGATGAAGAGGAGCTGCGGCAGCTGGTCTGCGCCTGCGCGCAGCACCAGCTGCCGCTGACC
CTGCGCGGCAGCGCCACCGGCAACTACGGACAGCTGGTCCCCCTCGAAGGCGGGCTGCTGGTGGATATGACCGGGCTCAA
CCAGATCGTCGCCCTCGGCAACGGCACAGTGAGGGCCCAGGCCGGCATTCGCCTGGCGGACATCGAAACCGCCGCCCGCC
CGACGGGCTGGGAGCTGCGCTGTATGCCATCGACCTATCGACTGGCGAGCCTGGGCGGTCTCTACGGCGGCGGGTTCGGC
GGTATCGGCTCCATCAACTATGGGCCGCTGGCGGCGCCCGGCAATGTGCTCAGCGTCAAAGTGATGACCGTCGAGCCGGC
CCCCCGCGTGCTGACCGTCCCGGCTCCCGAAGCGCTGCTCCTGCATCACGCCTACGGCAACAACGGCATTATCCTGGAGG
TTGAGCTGGCGCTGGCGCCCGTGCACCAGTGGATTGAACGCCTGGACGTGTTTGACGATTTCGCCGATGCGCTGAACTAT
GCCAACGCCTGCGTCCGCTCGCCGGGGCTGGTGAAGCGCCAGGTGGCGCTGCTGGCCACGCCGATCGCTGACTATTTTAG
CCACCTCAACGATCGTTACCATGCCGGGCAACATGCGGTTATCAGCCTGATCGCCGAGGAGAGCGAAGGACTCTGCGCCA
GCCTGTTACCGCGCCATCGCGGGAGCAACGCCATCCGGCAGGCCAGCGACGAGGCCCGGACGCGCAACGGCTCGTTAATG
GAATACTGCTGGAACCACACCACCCTGCATGCGCTCAAGGTGGACAATACGCTGACCTATCTGCAGACGGCGTTTGATCC
GCTGCGCTATCCGCAGCAAATTTTACAGATGGAGCAGCACTTCGCCGGGGAGGTAATGTCCCATATTGAATTCCTGCGCG
ATATCGAGGGCAATCTCACCGCCAGCGGTCTGCAGCTGGTGCGCTATACCACGCCCGAACGTCTTAACGCCATCATGCAG
ATATTTCGCGACAACGACGTCAAAATTAACAACCCCCACGTGCTGCAGGTTGAGGACGGCAAACAGGGCGTGATTCGTCC
CGACGTCGTGGCAGTGAAACAGTCTCTCGACCCGGCGGGATTGCTTAACCCCGGCAAGCTGCGCGGCTGGGCGCTGCGCG
ACCAGCTGGAACTCGACAGCAACCCGCTGACGCGGGCCACCCGCGAAAGCCCCACGACCTGA

Upstream 100 bases:

>100_bases
TTGGCGTGATGTCCTGGGTCTCGCGCCGGGCGCTCAGCGCCTGGCATGAAAGCGAAGCCGTGCAATCTCATTAATGTTCT
GCTGACGAACAGGAAAAAGA

Downstream 100 bases:

>100_bases
TGGTCCCCGGTCCGGTTGGGCGCTAACGGGTCGCTGGCCCGTTGCCGCCCAACCTCATCCTGCGCCGGACAGTCCCGCCA
TATGGACGATAAAGCCCACC

Product: putative FAD/FMN-containing dehydrogenases

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MMTDEQRQHAVAAIQQALPALEWTLQPAKIKRLSRDFHWFSPLLTEQLAGKQADAVVRPRDEEELRQLVCACAQHQLPLT
LRGSATGNYGQLVPLEGGLLVDMTGLNQIVALGNGTVRAQAGIRLADIETAARPTGWELRCMPSTYRLASLGGLYGGGFG
GIGSINYGPLAAPGNVLSVKVMTVEPAPRVLTVPAPEALLLHHAYGNNGIILEVELALAPVHQWIERLDVFDDFADALNY
ANACVRSPGLVKRQVALLATPIADYFSHLNDRYHAGQHAVISLIAEESEGLCASLLPRHRGSNAIRQASDEARTRNGSLM
EYCWNHTTLHALKVDNTLTYLQTAFDPLRYPQQILQMEQHFAGEVMSHIEFLRDIEGNLTASGLQLVRYTTPERLNAIMQ
IFRDNDVKINNPHVLQVEDGKQGVIRPDVVAVKQSLDPAGLLNPGKLRGWALRDQLELDSNPLTRATRESPTT

Sequences:

>Translated_473_residues
MMTDEQRQHAVAAIQQALPALEWTLQPAKIKRLSRDFHWFSPLLTEQLAGKQADAVVRPRDEEELRQLVCACAQHQLPLT
LRGSATGNYGQLVPLEGGLLVDMTGLNQIVALGNGTVRAQAGIRLADIETAARPTGWELRCMPSTYRLASLGGLYGGGFG
GIGSINYGPLAAPGNVLSVKVMTVEPAPRVLTVPAPEALLLHHAYGNNGIILEVELALAPVHQWIERLDVFDDFADALNY
ANACVRSPGLVKRQVALLATPIADYFSHLNDRYHAGQHAVISLIAEESEGLCASLLPRHRGSNAIRQASDEARTRNGSLM
EYCWNHTTLHALKVDNTLTYLQTAFDPLRYPQQILQMEQHFAGEVMSHIEFLRDIEGNLTASGLQLVRYTTPERLNAIMQ
IFRDNDVKINNPHVLQVEDGKQGVIRPDVVAVKQSLDPAGLLNPGKLRGWALRDQLELDSNPLTRATRESPTT
>Mature_473_residues
MMTDEQRQHAVAAIQQALPALEWTLQPAKIKRLSRDFHWFSPLLTEQLAGKQADAVVRPRDEEELRQLVCACAQHQLPLT
LRGSATGNYGQLVPLEGGLLVDMTGLNQIVALGNGTVRAQAGIRLADIETAARPTGWELRCMPSTYRLASLGGLYGGGFG
GIGSINYGPLAAPGNVLSVKVMTVEPAPRVLTVPAPEALLLHHAYGNNGIILEVELALAPVHQWIERLDVFDDFADALNY
ANACVRSPGLVKRQVALLATPIADYFSHLNDRYHAGQHAVISLIAEESEGLCASLLPRHRGSNAIRQASDEARTRNGSLM
EYCWNHTTLHALKVDNTLTYLQTAFDPLRYPQQILQMEQHFAGEVMSHIEFLRDIEGNLTASGLQLVRYTTPERLNAIMQ
IFRDNDVKINNPHVLQVEDGKQGVIRPDVVAVKQSLDPAGLLNPGKLRGWALRDQLELDSNPLTRATRESPTT

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51998; Mature: 51998

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTDEQRQHAVAAIQQALPALEWTLQPAKIKRLSRDFHWFSPLLTEQLAGKQADAVVRPR
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC
DEEELRQLVCACAQHQLPLTLRGSATGNYGQLVPLEGGLLVDMTGLNQIVALGNGTVRAQ
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCEEEEECCCEEEEE
AGIRLADIETAARPTGWELRCMPSTYRLASLGGLYGGGFGGIGSINYGPLAAPGNVLSVK
CCEEEEECHHCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
VMTVEPAPRVLTVPAPEALLLHHAYGNNGIILEVELALAPVHQWIERLDVFDDFADALNY
EEEECCCCCEEECCCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ANACVRSPGLVKRQVALLATPIADYFSHLNDRYHAGQHAVISLIAEESEGLCASLLPRHR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCHHHHHHCCCC
GSNAIRQASDEARTRNGSLMEYCWNHTTLHALKVDNTLTYLQTAFDPLRYPQQILQMEQH
CCHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
FAGEVMSHIEFLRDIEGNLTASGLQLVRYTTPERLNAIMQIFRDNDVKINNPHVLQVEDG
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEECCCEEEEECCC
KQGVIRPDVVAVKQSLDPAGLLNPGKLRGWALRDQLELDSNPLTRATRESPTT
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMTDEQRQHAVAAIQQALPALEWTLQPAKIKRLSRDFHWFSPLLTEQLAGKQADAVVRPR
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC
DEEELRQLVCACAQHQLPLTLRGSATGNYGQLVPLEGGLLVDMTGLNQIVALGNGTVRAQ
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCEEEEECCCEEEEE
AGIRLADIETAARPTGWELRCMPSTYRLASLGGLYGGGFGGIGSINYGPLAAPGNVLSVK
CCEEEEECHHCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
VMTVEPAPRVLTVPAPEALLLHHAYGNNGIILEVELALAPVHQWIERLDVFDDFADALNY
EEEECCCCCEEECCCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ANACVRSPGLVKRQVALLATPIADYFSHLNDRYHAGQHAVISLIAEESEGLCASLLPRHR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCHHHHHHCCCC
GSNAIRQASDEARTRNGSLMEYCWNHTTLHALKVDNTLTYLQTAFDPLRYPQQILQMEQH
CCHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
FAGEVMSHIEFLRDIEGNLTASGLQLVRYTTPERLNAIMQIFRDNDVKINNPHVLQVEDG
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEECCCEEEEECCC
KQGVIRPDVVAVKQSLDPAGLLNPGKLRGWALRDQLELDSNPLTRATRESPTT
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]