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The map label for this gene is ssuC [C]

Identifier: 238895085

GI number: 238895085

Start: 2965671

End: 2966486

Strand: Direct

Name: ssuC [C]

Synonym: KP1_3120

Alternate gene names: 238895085

Gene position: 2965671-2966486 (Clockwise)

Preceding gene: 238895084

Following gene: 238895086

Centisome position: 56.5

GC content: 61.4

Gene sequence:

>816_bases
ATGAAAACCACAACCGCAACGCCGTGGATCCAGCATCCGCGTTTTCTCAAAATTCTCTATCCGACCCTCGTCGCGGTGGC
GATGGTGCTCCTGTGGCAGGGCGCGGTGAGCTATTTCCGTATCCCGGCCTTTCTGGTGCCGTCGCCGCTGGTGATGCTGG
AAAGCCTGTGGACGCATCTCACGCCGCTGCTGCTGGCGCTGCTGTTCACCCTCAAGATCACCCTGATCTCGTTTCTGCTG
TCGATTGTCATCGGCGCCGCGGTGGCGTTTATCCTGGTGCAGAACCGCTTTGTGGAAACCGCCCTGTTTCCCTACATCGT
GTTTTTGCAGGTGACGCCGATCGTCGCCATCGCCCCGCTGATCATCATCTGGGTGAAGGATGCCACGCTCTCGCTGGTGG
TGTGCGCCACCCTGATGGCGGTGTTTCCCATCATCTCCAATACCACTCAGGGACTGCGCAGCGTCTCCCCCGGCCTGCTG
AGCTATTTTCGCCTCAATCACGCCAGCCGCTGGCAAACGCTGGTGCGGCTGCGTATCCCCTCGGCGCTGCCCTATTTCTT
CGGCGCGCTGCGTATTTCCAGTGGGCTGTCGCTGATTGGCGCGGTGGTGGCGGAGTTTGTCGCCGGGACCGGCGGGACCA
ATACCGGGCTGGCCTATCAGATCCTGCAGGCCGGCTACCAGCTGGATATCCCGCTGATGTTTGCCGCGCTGCTGCTGATC
TCTCTCGCCGGTATCGCGCTGTTTGGCGTGATGTCCTGGGTCTCGCGCCGGGCGCTCAGCGCCTGGCATGAAAGCGAAGC
CGTGCAATCTCATTAA

Upstream 100 bases:

>100_bases
CGCAGCGAGGCGTTCCGCGTCAGCCCGGCCTTTTCCCTGTATGCCCGTCAGCTGCAGGACAGTCTGTTGCAGGCCAGCCA
GTCTGGTATGGAGCCATAAT

Downstream 100 bases:

>100_bases
TGTTCTGCTGACGAACAGGAAAAAGAATGATGACTGATGAACAGCGTCAACACGCGGTCGCGGCGATCCAGCAGGCACTC
CCGGCGCTGGAGTGGACCTT

Product: putative ABC transport system inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKTTTATPWIQHPRFLKILYPTLVAVAMVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHLTPLLLALLFTLKITLISFLL
SIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKDATLSLVVCATLMAVFPIISNTTQGLRSVSPGLL
SYFRLNHASRWQTLVRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAGTGGTNTGLAYQILQAGYQLDIPLMFAALLLI
SLAGIALFGVMSWVSRRALSAWHESEAVQSH

Sequences:

>Translated_271_residues
MKTTTATPWIQHPRFLKILYPTLVAVAMVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHLTPLLLALLFTLKITLISFLL
SIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKDATLSLVVCATLMAVFPIISNTTQGLRSVSPGLL
SYFRLNHASRWQTLVRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAGTGGTNTGLAYQILQAGYQLDIPLMFAALLLI
SLAGIALFGVMSWVSRRALSAWHESEAVQSH
>Mature_271_residues
MKTTTATPWIQHPRFLKILYPTLVAVAMVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHLTPLLLALLFTLKITLISFLL
SIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPLIIIWVKDATLSLVVCATLMAVFPIISNTTQGLRSVSPGLL
SYFRLNHASRWQTLVRLRIPSALPYFFGALRISSGLSLIGAVVAEFVAGTGGTNTGLAYQILQAGYQLDIPLMFAALLLI
SLAGIALFGVMSWVSRRALSAWHESEAVQSH

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=233, Percent_Identity=26.6094420600858, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29663; Mature: 29663

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTTATPWIQHPRFLKILYPTLVAVAMVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TPLLLALLFTLKITLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIIWVKDATLSLVVCATLMAVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
SALPYFFGALRISSGLSLIGAVVAEFVAGTGGTNTGLAYQILQAGYQLDIPLMFAALLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
SLAGIALFGVMSWVSRRALSAWHESEAVQSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]