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The map label for this gene is yncE [H]

Identifier: 238894946

GI number: 238894946

Start: 2834566

End: 2835627

Strand: Reverse

Name: yncE [H]

Synonym: KP1_2971

Alternate gene names: 238894946

Gene position: 2835627-2834566 (Counterclockwise)

Preceding gene: 238894949

Following gene: 238894945

Centisome position: 54.03

GC content: 59.6

Gene sequence:

>1062_bases
ATGTCATTACGTCATTTTGCCGCGCCGCGACTGCGCCATTCACTGCTCGTCACTTCTCTGCTGCTGGCAGGCAGCTTTAG
CGCCCACGCCGCGGAAGAGATGCTGCGCAAGGCCGTCGGAAAAGGGGCCTACGAAATGGCCTACAGCCAGCAGGAGAATG
CGCTGTGGGTCGCCACATCACAGAGTCGTTCGCTGGACAAAGGCGGGGTGGTTTACCGTCTTGACCCCACCACCCTCGAC
GTGACGCAGATTATTCACAACGATCTGAAGCCGTTCGGCGCCACTATCAACCATGCCACCGGCACGCTGTGGTTTGGCAA
TACCGTCGACAGCACTGTCACCGCTATTGACGCCAAAACCGGCGCCGTGAAGGGGCGCCTGGTGCTGGACGAGCGTCAGC
GCAGCGAAACCGTGCGCCCGCTGCAGCCGCGCGAGCTGGCGGTCAATGAGCAGACCAACACGGTCTACATTACCGGTCTG
GGCAAAGAGAGCGTGATTTGGGTGGTAGATGGCGCGACCCTGAAGCTGAAAACGACCATTACCGGCACCGGGGCAATGGC
GACGGGTCTGGCGATCGATCCGCAGGCTAAGCGTCTGTATACCACCAACGCCGATGGCGAACTGCTGACCATCGACAGCG
AGAGCAACACGATTGCGTCGCGCAAAAAATTGCAGGATGACGGCAAAGCGCATTTCTATCTTAACCTGAGTCTCGATACC
GCCGGCCATCGTGCCTTTATTACCGACAGCAAGCAGCCGGAAGTGCTGGTGGTCGATACCCGCGACGGCAAGGTGCTGGA
GAAAATCGCCACGCCGGAGTCGCTGGCGGTGCTGTTTAACCCGGCGCGCAACGAAGCCTATGTGACGCATCGTAAGGCCG
GGGAAGTCAGCGTTATCGACGGCAAGAGCTACAAGGTGGTGAAGACCTTTAAAACGCCGACTCACCCCAACAGCCTGGCG
CTCTCCGAGGACGGCAAAACGCTGTACGTTAGCGTGAAACAGGCTTCCAGCCGTGAGAAAGAAGCCACCGCGCCGGACGA
TGTGATCCGCATCGCCCTGTAA

Upstream 100 bases:

>100_bases
AATGATTACTATTCGCATTCAATAATAAGGGTAAAGCCAGGACTTTACCGCCGGAAGCGATGTCGGGTCAGCACATACTG
GTTTATCAAAGGGAGTCGTC

Downstream 100 bases:

>100_bases
GACCTCAGCGCGACGAAACCGGAAAACGGTGGTCGCGCTCCGCATGCCGCCGGGCCTGGCCCGGCGACTCACCCTCTGTT
ACAAACGCCTATTGGCCTGA

Product: putative receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSLRHFAAPRLRHSLLVTSLLLAGSFSAHAAEEMLRKAVGKGAYEMAYSQQENALWVATSQSRSLDKGGVVYRLDPTTLD
VTQIIHNDLKPFGATINHATGTLWFGNTVDSTVTAIDAKTGAVKGRLVLDERQRSETVRPLQPRELAVNEQTNTVYITGL
GKESVIWVVDGATLKLKTTITGTGAMATGLAIDPQAKRLYTTNADGELLTIDSESNTIASRKKLQDDGKAHFYLNLSLDT
AGHRAFITDSKQPEVLVVDTRDGKVLEKIATPESLAVLFNPARNEAYVTHRKAGEVSVIDGKSYKVVKTFKTPTHPNSLA
LSEDGKTLYVSVKQASSREKEATAPDDVIRIAL

Sequences:

>Translated_353_residues
MSLRHFAAPRLRHSLLVTSLLLAGSFSAHAAEEMLRKAVGKGAYEMAYSQQENALWVATSQSRSLDKGGVVYRLDPTTLD
VTQIIHNDLKPFGATINHATGTLWFGNTVDSTVTAIDAKTGAVKGRLVLDERQRSETVRPLQPRELAVNEQTNTVYITGL
GKESVIWVVDGATLKLKTTITGTGAMATGLAIDPQAKRLYTTNADGELLTIDSESNTIASRKKLQDDGKAHFYLNLSLDT
AGHRAFITDSKQPEVLVVDTRDGKVLEKIATPESLAVLFNPARNEAYVTHRKAGEVSVIDGKSYKVVKTFKTPTHPNSLA
LSEDGKTLYVSVKQASSREKEATAPDDVIRIAL
>Mature_352_residues
SLRHFAAPRLRHSLLVTSLLLAGSFSAHAAEEMLRKAVGKGAYEMAYSQQENALWVATSQSRSLDKGGVVYRLDPTTLDV
TQIIHNDLKPFGATINHATGTLWFGNTVDSTVTAIDAKTGAVKGRLVLDERQRSETVRPLQPRELAVNEQTNTVYITGLG
KESVIWVVDGATLKLKTTITGTGAMATGLAIDPQAKRLYTTNADGELLTIDSESNTIASRKKLQDDGKAHFYLNLSLDTA
GHRAFITDSKQPEVLVVDTRDGKVLEKIATPESLAVLFNPARNEAYVTHRKAGEVSVIDGKSYKVVKTFKTPTHPNSLAL
SEDGKTLYVSVKQASSREKEATAPDDVIRIAL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=353, Percent_Identity=77.6203966005666, Blast_Score=545, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR015943 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38358; Mature: 38227

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRHFAAPRLRHSLLVTSLLLAGSFSAHAAEEMLRKAVGKGAYEMAYSQQENALWVATS
CCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCEEEEEEC
QSRSLDKGGVVYRLDPTTLDVTQIIHNDLKPFGATINHATGTLWFGNTVDSTVTAIDAKT
CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEECCEEEEEECCCCCCEEEEEECCC
GAVKGRLVLDERQRSETVRPLQPRELAVNEQTNTVYITGLGKESVIWVVDGATLKLKTTI
CCEEEEEEECCHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCEEEEEEEE
TGTGAMATGLAIDPQAKRLYTTNADGELLTIDSESNTIASRKKLQDDGKAHFYLNLSLDT
EECCCCEECEEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEEEEEC
AGHRAFITDSKQPEVLVVDTRDGKVLEKIATPESLAVLFNPARNEAYVTHRKAGEVSVID
CCCEEEEECCCCCCEEEEECCCCHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEE
GKSYKVVKTFKTPTHPNSLALSEDGKTLYVSVKQASSREKEATAPDDVIRIAL
CCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SLRHFAAPRLRHSLLVTSLLLAGSFSAHAAEEMLRKAVGKGAYEMAYSQQENALWVATS
CCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCEEEEEEC
QSRSLDKGGVVYRLDPTTLDVTQIIHNDLKPFGATINHATGTLWFGNTVDSTVTAIDAKT
CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEECCEEEEEECCCCCCEEEEEECCC
GAVKGRLVLDERQRSETVRPLQPRELAVNEQTNTVYITGLGKESVIWVVDGATLKLKTTI
CCEEEEEEECCHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCEEEEEEEE
TGTGAMATGLAIDPQAKRLYTTNADGELLTIDSESNTIASRKKLQDDGKAHFYLNLSLDT
EECCCCEECEEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEEEEEC
AGHRAFITDSKQPEVLVVDTRDGKVLEKIATPESLAVLFNPARNEAYVTHRKAGEVSVID
CCCEEEEECCCCCCEEEEECCCCHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEE
GKSYKVVKTFKTPTHPNSLALSEDGKTLYVSVKQASSREKEATAPDDVIRIAL
CCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]