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The map label for this gene is yiiS [H]

Identifier: 238894949

GI number: 238894949

Start: 2839993

End: 2840292

Strand: Reverse

Name: yiiS [H]

Synonym: KP1_2974

Alternate gene names: 238894949

Gene position: 2840292-2839993 (Counterclockwise)

Preceding gene: 238894951

Following gene: 238894946

Centisome position: 54.12

GC content: 57.33

Gene sequence:

>300_bases
ATGAAAGATGTAGTAGATAAATGCAGCACCAAAGGCTGCGCCATTGATGTCGGGACGATCATTGATAACGAGGACTGCGT
CTACCGGGCCGAGAAGGTGTTCCCAAGCCGCGAAGAAGCGGAATCCACCGTAGCCGCCGTGCGCGAACGTGCTGCCGCCG
CAGCGCCGGCCAGTGAACCGCCGCAGGTCGATTACACCATCGTCGCCGCTGGCGACGCGGTGAAACTCGACCTCTCCATC
GCCTTCTCCTGCCAGGCGGAAAAGATCATTTTCGAGTTATCCTTGCGAAATCTGCTTTAA

Upstream 100 bases:

>100_bases
GCGCGATATAATAGAAAAATTGCTAATCCTTACGGATATTAATGGTTTGCTTTTCGGCGGGCGGGTTCTTATCCTTAAGA
AAACTCAAGAGGTTATTACG

Downstream 100 bases:

>100_bases
TTCGCGCCTGTAGCGGAAGCGTGATGCTCTGGCGGGCAGGCGCCTTCCGCTAATGCAGCACGCTGCCCGCCCGGCGACCT
GAGCCGGGTGAGCGCGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEPPQVDYTIVAAGDAVKLDLSI
AFSCQAEKIIFELSLRNLL

Sequences:

>Translated_99_residues
MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEPPQVDYTIVAAGDAVKLDLSI
AFSCQAEKIIFELSLRNLL
>Mature_99_residues
MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEPPQVDYTIVAAGDAVKLDLSI
AFSCQAEKIIFELSLRNLL

Specific function: Unknown

COG id: COG3691

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0381 family [H]

Homologues:

Organism=Escherichia coli, GI1790357, Length=98, Percent_Identity=57.1428571428571, Blast_Score=114, Evalue=1e-27,
Organism=Escherichia coli, GI87082087, Length=84, Percent_Identity=45.2380952380952, Blast_Score=78, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005272 [H]

Pfam domain/function: PF04175 DUF406 [H]

EC number: NA

Molecular weight: Translated: 10620; Mature: 10620

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEP
CCCHHHHHCCCCCEEEECEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PQVDYTIVAAGDAVKLDLSIAFSCQAEKIIFELSLRNLL
CCCCEEEEECCCEEEEEEEEEEECCCCHHHEEEEHHHCC
>Mature Secondary Structure
MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKVFPSREEAESTVAAVRERAAAAAPASEP
CCCHHHHHCCCCCEEEECEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PQVDYTIVAAGDAVKLDLSIAFSCQAEKIIFELSLRNLL
CCCCEEEEECCCEEEEEEEEEEECCCCHHHEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]