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The map label for this gene is yddH [H]

Identifier: 238894931

GI number: 238894931

Start: 2821397

End: 2822044

Strand: Direct

Name: yddH [H]

Synonym: KP1_2954

Alternate gene names: 238894931

Gene position: 2821397-2822044 (Clockwise)

Preceding gene: 238894926

Following gene: 238894943

Centisome position: 53.76

GC content: 61.57

Gene sequence:

>648_bases
TTGATTACATTTTCATTGCGGCTTAACGTGTTACCTGCCAACCGACCCATTATTCAAGGAACGCCTATGAGCCGCTTTCG
CCACGTTGAACTGCAGTACGCCAGCCGCCTGCTCAACCACGGCCCAACCATTTTGATCACCAGCTACGATGCCCCGTCCG
ACCGGCGCAACGTTATGGCCGCCGCCTGGTCAATGCCGGTGGAATTCGCCCCGCCGCGGGTGGCTATCGTGGTGGATAAA
AGCACCTGGACGCGGGAGATCATCGAGCGCAATGGCACCTTCGGCATTGTGGTTCCCGGCGTCGCAGCCGCCAGCTGGAC
CTACGCCGTCGGCAGCGTCAGCGGCCGCGATGAGGACAAATTCAATGCCTGGGGGATCCCGGTAGTAACCGGTCCGGAGC
TGGGGCTGCCGCTGATCGAGGAGAAATGCCTGGCATGGATGGAGTGCCGGTTGCTGCCGGCGACGGCGGCCCAGACCCAG
TACGATACCCTGTTCGGGGAGGTGGTCTCTGCCGCCGCCGATGAGCGCGCGTTCGTCACCGGACGCTGGCAATTCGACGA
CGATAAGCTCAATACCCTGCATCATCTGGGCACCGGCAATTTTGTCGCCAGCGGCCGTCATGTGCGGGCAAACTCCCTCG
ACGAATAA

Upstream 100 bases:

>100_bases
CGACGGGGCACGCTCACCTGGGATAGCATCAGGGGAGCCAACATATTGTGATCCTCTTTGGGACTTAGTGCTGGCGACTA
TAGTCAGACGAGATGACGTA

Downstream 100 bases:

>100_bases
ACCGTTCTCGACGATTTCGGCAGCAAAGGCTTTACCGCCGGTGGGACATGGAACTTCGGCGTGCAGACGGAGATTTGGTT
CTGACCGAGTGTCACTGGCG

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MITFSLRLNVLPANRPIIQGTPMSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDK
STWTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQ
YDTLFGEVVSAAADERAFVTGRWQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE

Sequences:

>Translated_215_residues
MITFSLRLNVLPANRPIIQGTPMSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDK
STWTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQ
YDTLFGEVVSAAADERAFVTGRWQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE
>Mature_215_residues
MITFSLRLNVLPANRPIIQGTPMSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDK
STWTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQ
YDTLFGEVVSAAADERAFVTGRWQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=188, Percent_Identity=80.3191489361702, Blast_Score=320, Evalue=3e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 23722; Mature: 23722

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFSLRLNVLPANRPIIQGTPMSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMA
CEEEEEEEEEEECCCCEEECCCHHHHEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHEEE
AAWSMPVEFAPPRVAIVVDKSTWTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDK
EECCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCC
FNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVT
CCCCCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
GRWQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE
EEEEECCCHHHHHHHCCCCCEEECCCEEECCCCCC
>Mature Secondary Structure
MITFSLRLNVLPANRPIIQGTPMSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMA
CEEEEEEEEEEECCCCEEECCCHHHHEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHEEE
AAWSMPVEFAPPRVAIVVDKSTWTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDK
EECCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCC
FNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVT
CCCCCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
GRWQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE
EEEEECCCHHHHHHHCCCCCEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]