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The map label for this gene is ydeP [H]

Identifier: 238894869

GI number: 238894869

Start: 2756576

End: 2758876

Strand: Reverse

Name: ydeP [H]

Synonym: KP1_2886

Alternate gene names: 238894869

Gene position: 2758876-2756576 (Counterclockwise)

Preceding gene: 238894870

Following gene: 238894868

Centisome position: 52.56

GC content: 62.15

Gene sequence:

>2301_bases
ATGACCAATAAAAGACGCGCGGTTCCCGGTGTTCACCCCTATGACGGTCCGGCAGGCGGGTGGGGCGCGTTGAAGGCCAC
GGCCATCGCCGTGCGCACCCAGATGGATGCCTTTGAGGCGCCCGCCACGCTGCTGCGTACCAACCAGCCGGACGGTTTTG
ACTGCCCGGGCTGCGCCTGGCCGGATAAAGAACATAAATCGACCTTCCAGTTTTGCGAAAACGGCGCCAAAGCCGTGACC
TGGGAGGCGACCACCAAACGGGTGACGCCCGCATTCCTCGCGGCAAATACCGTATCTTCCCTGCTGGCAAAAAGCGATTT
TGAACTGGAGGGCTACGGCCGCTTAACCCATCCTTTGGTTTACGACCGGGACAGCGATACCCTGCGTCCGGTGGCGTGGG
AGCAAGCCTTCGCCCGTATCGGCGAGATCCTCCGCGGCCTGCAGCCGGATGAGGTTGAATTCTACACCTCTGGCCGAGCC
TCCAACGAAGCGGCGTGGCTGTTCCAGCTGTTTGCCCGCGAGTATGGCACTAACAACTTCCCCGATTGCTCCAACATGTG
TCATGAATCCACCAGCGTGGGCCTGCCACAGTCGATCGGCATTGGTAAAGGCACCGTCTCCCTCGACGATTTTGACCAGA
CCGAGCTGGTGATCTCCATCGGCCATAATCCGGGCACCAACCACCCGCGGATGATGGGCACCCTGCATGAGCTATCCCGC
CGCGGCGTGCCGATTATCGTTTTCAATCCGCTGCGTGAACGGGCGCTGGAGCGTTTTGCCGATCCGCAGAACGTGATGGA
GATGGCGACCCGGCGCTCGACGCCGATCGCCTCGACCTACTACCAGGTACGGGCCGGCGGCGACGCGGCGGCGCTGAAAG
GGATCGCCAAAGCGCTGCTGCAGCTGGAGGAGGAGCAGGGCAATGTGCTCGACCACGCGTTTATTGCCCAACATACCCAG
GGATTCACCGCCTTCGCCGATGACCTCCACGCCACCCGCTGGCAGGACATCGAACAGGAGTCTGGCCTGACGCGCGAATC
CCTGAACCAGGTTGCGGCGGCTTACGCCAAATCCAGGGCCACCATCGTCACCTACGGTATGGGCATCACCCAGCATAACA
AAGGCACCTCCAACGTGCGTCTGATTGCCGACCTGCTGCTGATGCGCGGCAATATCGGCAAGCCGGGGGCCGGGATCTGT
CCTTTGCGCGGTCACTCGAACGTCCAGGGTAACCGCACTGTCGGGATTAGCGAAAAACCCTCCGCGGCTTTCCTCGACAG
CCTGCAGCGGGTGATGGGGATTACGCCGCCGCGGCATCATGGCCACGATGCGGTAAAAGCCCTGGAGGCCATGATCGCCG
GCGAAGCCAAAGCGCTGATCTGCCTTGGGGGCAACTTCGCCGTGGCGATGCCGGACCACGAACGCGCCTTCCCGGCGATG
CGCGGCCTTGAGCTCAGCGTTCACGTCGGCACCAAGCTCAACCGCTCACATCTCCTGACGGCGAAAGAGACCTTTATTCT
GCCGTGTCTGGGCCGCACCGAGCTTGACCTGCAGGCCAGCGGCCGGCAGTCGATCACCGTCGAGGATTCGATGTCGATGG
TGCATGCTTCGTCGGGCAAGCTTAAGCCCGCCTCGCCGATGCTGCGCTCGGAGCCGGCGATTGTCGCCGGTCTGGCGAAG
GCCACCTTGCCCGCCAGCAAAGTGGACTGGCAGTACCTCGTGGAAGACTACGATCGCATTCGCGATCTGATCGAACAGAC
CATTCCAGGGTTCGAGAATTATAACCAGCGCATTCGCCATCCTGGAGGCTTCCGCATGCCGCTGCCGCCGACCGAGCGCA
TCTGGCCTACCGCCACCGGTAAAGCCATGTTCTCGGTATTTAAAGGGGTGCATGAGAACGTGGTGGTGGAGGGTGAGGAC
GTGATGCGCCTGGTGACGCTGCGCAGTCATGACCAGTACAACACCACCATCTACGCGATGGATGACCGCTACCGTGGCGT
CTTTGGCCGCCGCGACGTGCTGTTTATGAACGAGCAGGATATGGCCGCCCAGGGGCTGGAGCATGGCGATCGGGTGGATA
TCCATACCGCGCTGCCAGACAGCGAGCTGACGCTGGAAGATATCACGGTGGTGGCCTACGGCATCGCGCCGGGCACCGTC
GGGGCCTATTATCCGGAAGCCAACGTGCTGGTGCCGCTGAACTATCTCGATGAAGAGAGCGGCACCCCTTCGTATAAGTC
GGTTCCCGTTCGTCTGACGCTGCGCTCGAAAGAGATCCGTCCGCTGGCCGGCGGGCGCTAA

Upstream 100 bases:

>100_bases
TCTTTTCAGGTGACGCCATGCGATTCACGCTTCGTCGCCGGGGTTGTCGTACGCCTTTTTCGGCTAGAGACAGCCAGAAC
AGAGCAGCAGGAGTAAAGAG

Downstream 100 bases:

>100_bases
AAAGGTATAGCGCAGAGCGGCGTCGCGCCGTCCTGCGCCCCGCAGCACCTCGTGGTGTCCTCGCTTGAATTTATCGCTAG
CGAAACTAACATTCTGGTAA

Product: oxidoreductase alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 766; Mature: 765

Protein sequence:

>766_residues
MTNKRRAVPGVHPYDGPAGGWGALKATAIAVRTQMDAFEAPATLLRTNQPDGFDCPGCAWPDKEHKSTFQFCENGAKAVT
WEATTKRVTPAFLAANTVSSLLAKSDFELEGYGRLTHPLVYDRDSDTLRPVAWEQAFARIGEILRGLQPDEVEFYTSGRA
SNEAAWLFQLFAREYGTNNFPDCSNMCHESTSVGLPQSIGIGKGTVSLDDFDQTELVISIGHNPGTNHPRMMGTLHELSR
RGVPIIVFNPLRERALERFADPQNVMEMATRRSTPIASTYYQVRAGGDAAALKGIAKALLQLEEEQGNVLDHAFIAQHTQ
GFTAFADDLHATRWQDIEQESGLTRESLNQVAAAYAKSRATIVTYGMGITQHNKGTSNVRLIADLLLMRGNIGKPGAGIC
PLRGHSNVQGNRTVGISEKPSAAFLDSLQRVMGITPPRHHGHDAVKALEAMIAGEAKALICLGGNFAVAMPDHERAFPAM
RGLELSVHVGTKLNRSHLLTAKETFILPCLGRTELDLQASGRQSITVEDSMSMVHASSGKLKPASPMLRSEPAIVAGLAK
ATLPASKVDWQYLVEDYDRIRDLIEQTIPGFENYNQRIRHPGGFRMPLPPTERIWPTATGKAMFSVFKGVHENVVVEGED
VMRLVTLRSHDQYNTTIYAMDDRYRGVFGRRDVLFMNEQDMAAQGLEHGDRVDIHTALPDSELTLEDITVVAYGIAPGTV
GAYYPEANVLVPLNYLDEESGTPSYKSVPVRLTLRSKEIRPLAGGR

Sequences:

>Translated_766_residues
MTNKRRAVPGVHPYDGPAGGWGALKATAIAVRTQMDAFEAPATLLRTNQPDGFDCPGCAWPDKEHKSTFQFCENGAKAVT
WEATTKRVTPAFLAANTVSSLLAKSDFELEGYGRLTHPLVYDRDSDTLRPVAWEQAFARIGEILRGLQPDEVEFYTSGRA
SNEAAWLFQLFAREYGTNNFPDCSNMCHESTSVGLPQSIGIGKGTVSLDDFDQTELVISIGHNPGTNHPRMMGTLHELSR
RGVPIIVFNPLRERALERFADPQNVMEMATRRSTPIASTYYQVRAGGDAAALKGIAKALLQLEEEQGNVLDHAFIAQHTQ
GFTAFADDLHATRWQDIEQESGLTRESLNQVAAAYAKSRATIVTYGMGITQHNKGTSNVRLIADLLLMRGNIGKPGAGIC
PLRGHSNVQGNRTVGISEKPSAAFLDSLQRVMGITPPRHHGHDAVKALEAMIAGEAKALICLGGNFAVAMPDHERAFPAM
RGLELSVHVGTKLNRSHLLTAKETFILPCLGRTELDLQASGRQSITVEDSMSMVHASSGKLKPASPMLRSEPAIVAGLAK
ATLPASKVDWQYLVEDYDRIRDLIEQTIPGFENYNQRIRHPGGFRMPLPPTERIWPTATGKAMFSVFKGVHENVVVEGED
VMRLVTLRSHDQYNTTIYAMDDRYRGVFGRRDVLFMNEQDMAAQGLEHGDRVDIHTALPDSELTLEDITVVAYGIAPGTV
GAYYPEANVLVPLNYLDEESGTPSYKSVPVRLTLRSKEIRPLAGGR
>Mature_765_residues
TNKRRAVPGVHPYDGPAGGWGALKATAIAVRTQMDAFEAPATLLRTNQPDGFDCPGCAWPDKEHKSTFQFCENGAKAVTW
EATTKRVTPAFLAANTVSSLLAKSDFELEGYGRLTHPLVYDRDSDTLRPVAWEQAFARIGEILRGLQPDEVEFYTSGRAS
NEAAWLFQLFAREYGTNNFPDCSNMCHESTSVGLPQSIGIGKGTVSLDDFDQTELVISIGHNPGTNHPRMMGTLHELSRR
GVPIIVFNPLRERALERFADPQNVMEMATRRSTPIASTYYQVRAGGDAAALKGIAKALLQLEEEQGNVLDHAFIAQHTQG
FTAFADDLHATRWQDIEQESGLTRESLNQVAAAYAKSRATIVTYGMGITQHNKGTSNVRLIADLLLMRGNIGKPGAGICP
LRGHSNVQGNRTVGISEKPSAAFLDSLQRVMGITPPRHHGHDAVKALEAMIAGEAKALICLGGNFAVAMPDHERAFPAMR
GLELSVHVGTKLNRSHLLTAKETFILPCLGRTELDLQASGRQSITVEDSMSMVHASSGKLKPASPMLRSEPAIVAGLAKA
TLPASKVDWQYLVEDYDRIRDLIEQTIPGFENYNQRIRHPGGFRMPLPPTERIWPTATGKAMFSVFKGVHENVVVEGEDV
MRLVTLRSHDQYNTTIYAMDDRYRGVFGRRDVLFMNEQDMAAQGLEHGDRVDIHTALPDSELTLEDITVVAYGIAPGTVG
AYYPEANVLVPLNYLDEESGTPSYKSVPVRLTLRSKEIRPLAGGR

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=751, Percent_Identity=55.392809587217, Blast_Score=853, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=308, Percent_Identity=29.8701298701299, Blast_Score=157, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84011; Mature: 83880

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKRRAVPGVHPYDGPAGGWGALKATAIAVRTQMDAFEAPATLLRTNQPDGFDCPGCAW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
PDKEHKSTFQFCENGAKAVTWEATTKRVTPAFLAANTVSSLLAKSDFELEGYGRLTHPLV
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YDRDSDTLRPVAWEQAFARIGEILRGLQPDEVEFYTSGRASNEAAWLFQLFAREYGTNNF
EECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHESTSVGLPQSIGIGKGTVSLDDFDQTELVISIGHNPGTNHPRMMGTLHELSR
CCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
RGVPIIVFNPLRERALERFADPQNVMEMATRRSTPIASTYYQVRAGGDAAALKGIAKALL
CCCCEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCEEEEECCCCHHHHHHHHHHHH
QLEEEQGNVLDHAFIAQHTQGFTAFADDLHATRWQDIEQESGLTRESLNQVAAAYAKSRA
HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
TIVTYGMGITQHNKGTSNVRLIADLLLMRGNIGKPGAGICPLRGHSNVQGNRTVGISEKP
EEEEEECCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
SAAFLDSLQRVMGITPPRHHGHDAVKALEAMIAGEAKALICLGGNFAVAMPDHERAFPAM
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHH
RGLELSVHVGTKLNRSHLLTAKETFILPCLGRTELDLQASGRQSITVEDSMSMVHASSGK
HCCEEEEEECCCCCCHHEEEECCEEEEECCCCCCEEEECCCCCEEEEHHHHHHHCCCCCC
LKPASPMLRSEPAIVAGLAKATLPASKVDWQYLVEDYDRIRDLIEQTIPGFENYNQRIRH
CCCCCCCHHCCCHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PGGFRMPLPPTERIWPTATGKAMFSVFKGVHENVVVEGEDVMRLVTLRSHDQYNTTIYAM
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHEEEEHHHCCCCCCCEEEEE
DDRYRGVFGRRDVLFMNEQDMAAQGLEHGDRVDIHTALPDSELTLEDITVVAYGIAPGTV
CCCCCCCCCCCCEEEECCHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCC
GAYYPEANVLVPLNYLDEESGTPSYKSVPVRLTLRSKEIRPLAGGR
CCCCCCCCEEEEEHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TNKRRAVPGVHPYDGPAGGWGALKATAIAVRTQMDAFEAPATLLRTNQPDGFDCPGCAW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
PDKEHKSTFQFCENGAKAVTWEATTKRVTPAFLAANTVSSLLAKSDFELEGYGRLTHPLV
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YDRDSDTLRPVAWEQAFARIGEILRGLQPDEVEFYTSGRASNEAAWLFQLFAREYGTNNF
EECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHESTSVGLPQSIGIGKGTVSLDDFDQTELVISIGHNPGTNHPRMMGTLHELSR
CCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
RGVPIIVFNPLRERALERFADPQNVMEMATRRSTPIASTYYQVRAGGDAAALKGIAKALL
CCCCEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCEEEEECCCCHHHHHHHHHHHH
QLEEEQGNVLDHAFIAQHTQGFTAFADDLHATRWQDIEQESGLTRESLNQVAAAYAKSRA
HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
TIVTYGMGITQHNKGTSNVRLIADLLLMRGNIGKPGAGICPLRGHSNVQGNRTVGISEKP
EEEEEECCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
SAAFLDSLQRVMGITPPRHHGHDAVKALEAMIAGEAKALICLGGNFAVAMPDHERAFPAM
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHH
RGLELSVHVGTKLNRSHLLTAKETFILPCLGRTELDLQASGRQSITVEDSMSMVHASSGK
HCCEEEEEECCCCCCHHEEEECCEEEEECCCCCCEEEECCCCCEEEEHHHHHHHCCCCCC
LKPASPMLRSEPAIVAGLAKATLPASKVDWQYLVEDYDRIRDLIEQTIPGFENYNQRIRH
CCCCCCCHHCCCHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PGGFRMPLPPTERIWPTATGKAMFSVFKGVHENVVVEGEDVMRLVTLRSHDQYNTTIYAM
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHEEEEHHHCCCCCCCEEEEE
DDRYRGVFGRRDVLFMNEQDMAAQGLEHGDRVDIHTALPDSELTLEDITVVAYGIAPGTV
CCCCCCCCCCCCEEEECCHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCC
GAYYPEANVLVPLNYLDEESGTPSYKSVPVRLTLRSKEIRPLAGGR
CCCCCCCCEEEEEHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]