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The map label for this gene is ytfH [C]

Identifier: 238894810

GI number: 238894810

Start: 2691510

End: 2692067

Strand: Direct

Name: ytfH [C]

Synonym: KP1_2823

Alternate gene names: 238894810

Gene position: 2691510-2692067 (Clockwise)

Preceding gene: 238894808

Following gene: 238894811

Centisome position: 51.28

GC content: 60.57

Gene sequence:

>558_bases
ATGAAAAATGAACCGCTTTGCCACGCTCCCTGCCCCATCGCCCGCAGCCTTGGCCGCATCGGCGACAGCTGGAGCATCAT
GATCCTGCGCGATGCCTTCGCGGGCTTTACCCGCTTTGACGAGTTCCAGAAAAGCAGCAACGTCGCGCCCAATATTCTGT
CGCGCCGCCTGAAGGCGCTGGTCGATGACGGACTGCTGGAGAAGGTGTGCTACAGCAGCACCCCGCCGCGCTACGAATAC
CACCTCACGCCGCGCGGCCGCGATTTCCGCATGGTGCTGCTGGCGCTGGCGGAATGGGGTAACCGCCACTTCGCCCCCGA
AGGCCGTCAGATGCAGTTGGTGGAAACCGCCACCCAGCGACGGGTGGAGCCAGTCATGGTGGATAAAGCGACTGGGGAAG
AGATTATCCCGGGTAAATACGCCATGGTGCCGGGCCCCGCCGCCTCGCCGCTGATGAAATATCGTCATGAATATCTGCTG
CGCAAACGCGAAGGCGATAGCGGACAAAAATTCCAACCGGAACCTTACAGAGATGCCAGCAATGAATCCGGCCAGTAA

Upstream 100 bases:

>100_bases
CGGCAGCGGCTTCTTCTCCGAGTACCATGAAGGGTAACTTGCATTTTGATAGTGACTATGTCAATTTGCTGGCAAAAGCC
ACCTGGTTACTGGACAGCCC

Downstream 100 bases:

>100_bases
GAAAAGCGTCCTCGTTCTGGCGGCCCTGGGGGCTGCCGCCCTGGCGGCAGCGAGCTACGGCGCTTACTGGTGGCATACCG
GGCGCTTTATGCAGACCACC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKNEPLCHAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKALVDDGLLEKVCYSSTPPRYEY
HLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVETATQRRVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLL
RKREGDSGQKFQPEPYRDASNESGQ

Sequences:

>Translated_185_residues
MKNEPLCHAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKALVDDGLLEKVCYSSTPPRYEY
HLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVETATQRRVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLL
RKREGDSGQKFQPEPYRDASNESGQ
>Mature_185_residues
MKNEPLCHAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKALVDDGLLEKVCYSSTPPRYEY
HLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVETATQRRVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLL
RKREGDSGQKFQPEPYRDASNESGQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=100, Percent_Identity=33, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 21026; Mature: 21026

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEPLCHAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKAL
CCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VDDGLLEKVCYSSTPPRYEYHLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVETATQR
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHH
RVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLLRKREGDSGQKFQPEPYRDAS
CCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NESGQ
CCCCC
>Mature Secondary Structure
MKNEPLCHAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKAL
CCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VDDGLLEKVCYSSTPPRYEYHLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVETATQR
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHH
RVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLLRKREGDSGQKFQPEPYRDAS
CCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NESGQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]