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The map label for this gene is ygbN [H]

Identifier: 238894627

GI number: 238894627

Start: 2518574

End: 2519938

Strand: Reverse

Name: ygbN [H]

Synonym: KP1_2628

Alternate gene names: 238894627

Gene position: 2519938-2518574 (Counterclockwise)

Preceding gene: 238894628

Following gene: 238894625

Centisome position: 48.01

GC content: 60.15

Gene sequence:

>1365_bases
ATGTCGACATCGGCGCTGTTACTTATTGCGTTAGCCAGCGTAGTGCTGTTGCTCCTGTTAGTGATCAAAGCGAAAGCACA
TCCTTTTGTGGCGCTCCTGATCGTCAGCCTGCTGGTGGCATTCGCCACCGGCATTCCGGCAGATAAAATTATAACCACCA
TTGAAAAAGGCATGGGCGGCCTGCTTGGCCACATCGCCAGCATTATTATTCTGGGCTCAATGCTGGGGGTGCTGATTGAA
ATGTCCGGCGGCGCCGAATCGCTGGCGAAAACGTTGACCGGCGTACTGGGTGCAAAACGAACCATTGCCGCCTTAACCAT
TGTGGCTTTTATTCTCGGCACCCCGGTCTTTTTTGAAGTCGGCTTTATCATCATCATTCCGTTAATCTACGGCTTCAGCA
AAGTCGCCCACGTGTCGCCGATGAAGTTTGGCCTGCCGATGGCCGGCGTGATGTTAACCGTCCACGTGGCGCTGCCCACC
CATCCTGGCGCAGCGGCTGCGGCAGGCATTCTGCATAGCGATGTCGGTTGGCTGATGCTGGCGGGGATTGGGGTGTCGGT
GGTCGTCGGTATCGTGGGCTATTTTGTCGCCCGGTTTATCAATCGGCGCCATTATCATCTGTCGATTAACGTGCTGGAGC
AGCAACAAACGGCGGAAGTACCGGATCTCTCGGTTAACGCGCAGCAGACCCGTCTGCCGCCGCCGAATGCGCTGGTTATC
GGTGGGCTGATCGTGGTGCCCATCATGCTGATTGTTTCCGGGACGCTGTGTCAGGCGCTTCTGCTGCCGGAAAACGCGGT
TCGCCAGCTGATGACCGTCATTGGTACCCCGCCGGTCGCCCTGCTGATCTCCCTGGGCCTGGCCAGCTGGACGCTGGGCA
TCCGTCGGCGGATGAGCCTGAAAAAGCTGGGCGAAGTCACCGGCAGCGCGATCCCCTCGTCGGCGGACGTGATCCTCGTC
GCCGGCGCCGGCGGCGCCTTTGGCGGCGTACTGGTCGCTTCCGGCATCGGTAATGCCTTAGCCGAGGCGCTGGAGACAAT
ACATCTGCCGCTGATGCCCGCCGCTTTTCTGCTATCGCTGGTGCTCAGAGCCTCGCAGGGTTCGGCCACCGTGGCGATCC
TCACCACCTCCGGTCTGCTGTCGCAGGCGGTTGTCGGTCTGGAGCCGCTGCAGCTGGTGCTGGTGACGCTGGCGACCTGC
TTCGGCTCGCTCGGGCTGTCGCACGTCAACGACGCCGGGTTCTGGGTCGTCACGCGCTATCTCGGACTCTCGGTGCCGGA
TGGACTCAAAACCTGGACCGTCTTGACAACCATCATGGGGGTGACGGGCTTTCTCATCACCTGGCTGCTGTGGTTTGCGC
TTTGA

Upstream 100 bases:

>100_bases
GCTTTCCGGGCTGGGGTGGTTCTCGCCCTACCGGAAAAAATAAACGCCGTTTTCTAAAAAAATAACTCTCTGTACACCTG
TTAATACCCGAGGCAAACCT

Downstream 100 bases:

>100_bases
TGTTAACCTGGGTGGCTCCGGCCACCTTAACTTCGCCCCGGCACAGGCCCTGACCCACTACCGCTGTCAGACCGCAGACC
CGCTGCCGACAGCGTCACCG

Product: inner membrane permease YgbN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSTSALLLIALASVVLLLLLVIKAKAHPFVALLIVSLLVAFATGIPADKIITTIEKGMGGLLGHIASIIILGSMLGVLIE
MSGGAESLAKTLTGVLGAKRTIAALTIVAFILGTPVFFEVGFIIIIPLIYGFSKVAHVSPMKFGLPMAGVMLTVHVALPT
HPGAAAAAGILHSDVGWLMLAGIGVSVVVGIVGYFVARFINRRHYHLSINVLEQQQTAEVPDLSVNAQQTRLPPPNALVI
GGLIVVPIMLIVSGTLCQALLLPENAVRQLMTVIGTPPVALLISLGLASWTLGIRRRMSLKKLGEVTGSAIPSSADVILV
AGAGGAFGGVLVASGIGNALAEALETIHLPLMPAAFLLSLVLRASQGSATVAILTTSGLLSQAVVGLEPLQLVLVTLATC
FGSLGLSHVNDAGFWVVTRYLGLSVPDGLKTWTVLTTIMGVTGFLITWLLWFAL

Sequences:

>Translated_454_residues
MSTSALLLIALASVVLLLLLVIKAKAHPFVALLIVSLLVAFATGIPADKIITTIEKGMGGLLGHIASIIILGSMLGVLIE
MSGGAESLAKTLTGVLGAKRTIAALTIVAFILGTPVFFEVGFIIIIPLIYGFSKVAHVSPMKFGLPMAGVMLTVHVALPT
HPGAAAAAGILHSDVGWLMLAGIGVSVVVGIVGYFVARFINRRHYHLSINVLEQQQTAEVPDLSVNAQQTRLPPPNALVI
GGLIVVPIMLIVSGTLCQALLLPENAVRQLMTVIGTPPVALLISLGLASWTLGIRRRMSLKKLGEVTGSAIPSSADVILV
AGAGGAFGGVLVASGIGNALAEALETIHLPLMPAAFLLSLVLRASQGSATVAILTTSGLLSQAVVGLEPLQLVLVTLATC
FGSLGLSHVNDAGFWVVTRYLGLSVPDGLKTWTVLTTIMGVTGFLITWLLWFAL
>Mature_453_residues
STSALLLIALASVVLLLLLVIKAKAHPFVALLIVSLLVAFATGIPADKIITTIEKGMGGLLGHIASIIILGSMLGVLIEM
SGGAESLAKTLTGVLGAKRTIAALTIVAFILGTPVFFEVGFIIIIPLIYGFSKVAHVSPMKFGLPMAGVMLTVHVALPTH
PGAAAAAGILHSDVGWLMLAGIGVSVVVGIVGYFVARFINRRHYHLSINVLEQQQTAEVPDLSVNAQQTRLPPPNALVIG
GLIVVPIMLIVSGTLCQALLLPENAVRQLMTVIGTPPVALLISLGLASWTLGIRRRMSLKKLGEVTGSAIPSSADVILVA
GAGGAFGGVLVASGIGNALAEALETIHLPLMPAAFLLSLVLRASQGSATVAILTTSGLLSQAVVGLEPLQLVLVTLATCF
GSLGLSHVNDAGFWVVTRYLGLSVPDGLKTWTVLTTIMGVTGFLITWLLWFAL

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1789097, Length=451, Percent_Identity=61.1973392461197, Blast_Score=513, Evalue=1e-146,
Organism=Escherichia coli, GI1790716, Length=440, Percent_Identity=32.2727272727273, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI48994939, Length=454, Percent_Identity=31.7180616740088, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI48994935, Length=442, Percent_Identity=32.1266968325792, Blast_Score=199, Evalue=4e-52,
Organism=Escherichia coli, GI1788707, Length=443, Percent_Identity=31.1512415349887, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI2367370, Length=448, Percent_Identity=33.0357142857143, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1790776, Length=437, Percent_Identity=28.3752860411899, Blast_Score=171, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46978; Mature: 46847

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSALLLIALASVVLLLLLVIKAKAHPFVALLIVSLLVAFATGIPADKIITTIEKGMGG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLGHIASIIILGSMLGVLIEMSGGAESLAKTLTGVLGAKRTIAALTIVAFILGTPVFFEV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH
GFIIIIPLIYGFSKVAHVSPMKFGLPMAGVMLTVHVALPTHPGAAAAAGILHSDVGWLML
HHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH
AGIGVSVVVGIVGYFVARFINRRHYHLSINVLEQQQTAEVPDLSVNAQQTRLPPPNALVI
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHCCCCCCCCCCHHCCCCCCCHHHH
GGLIVVPIMLIVSGTLCQALLLPENAVRQLMTVIGTPPVALLISLGLASWTLGIRRRMSL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KKLGEVTGSAIPSSADVILVAGAGGAFGGVLVASGIGNALAEALETIHLPLMPAAFLLSL
HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VLRASQGSATVAILTTSGLLSQAVVGLEPLQLVLVTLATCFGSLGLSHVNDAGFWVVTRY
HHHCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LGLSVPDGLKTWTVLTTIMGVTGFLITWLLWFAL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STSALLLIALASVVLLLLLVIKAKAHPFVALLIVSLLVAFATGIPADKIITTIEKGMGG
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLGHIASIIILGSMLGVLIEMSGGAESLAKTLTGVLGAKRTIAALTIVAFILGTPVFFEV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH
GFIIIIPLIYGFSKVAHVSPMKFGLPMAGVMLTVHVALPTHPGAAAAAGILHSDVGWLML
HHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH
AGIGVSVVVGIVGYFVARFINRRHYHLSINVLEQQQTAEVPDLSVNAQQTRLPPPNALVI
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHCCCCCCCCCCHHCCCCCCCHHHH
GGLIVVPIMLIVSGTLCQALLLPENAVRQLMTVIGTPPVALLISLGLASWTLGIRRRMSL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KKLGEVTGSAIPSSADVILVAGAGGAFGGVLVASGIGNALAEALETIHLPLMPAAFLLSL
HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VLRASQGSATVAILTTSGLLSQAVVGLEPLQLVLVTLATCFGSLGLSHVNDAGFWVVTRY
HHHCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LGLSVPDGLKTWTVLTTIMGVTGFLITWLLWFAL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]