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The map label for this gene is ynfH [H]

Identifier: 238894600

GI number: 238894600

Start: 2495386

End: 2496243

Strand: Reverse

Name: ynfH [H]

Synonym: KP1_2601

Alternate gene names: 238894600

Gene position: 2496243-2495386 (Counterclockwise)

Preceding gene: 238894601

Following gene: 238894599

Centisome position: 47.56

GC content: 61.31

Gene sequence:

>858_bases
ATGGGAAACGGATGGCATGAATGGCCGCTGGTGCTGTTTACGGTGCTGAGTCAGTGCGTGGTCGGCGCGACCATCGTCAG
CGGTCTTGGCTGGCTGGCGCTGGGGGACCAACGGGAAGCCCGGCGGCGGCTGGTGCGCAATATGTTTTTTATCTGGCTGT
TGATGGGCATTGGTTTTCTTGCTTCGGTGATGCATCTCGGTTCACCGCTGCGCGCGTTTAACTCGCTGAACCGCATCGGC
GCCTCGGCGCTGAGCAACGAAATCGCCAGCGGCGCTCTGTTCTTCGCCGTGGGCGGATTCTGGTGGCTGCTGGCGGTGCT
GGAAAAAATGCCGGCGACGCTGGGTAAAGTCTGGCTGGCGATCGCCATGCTGTTAGGGCTGCTGTTTGTCCTCGCAATGA
CCCGGGTTTACCAAATCAATACTGTGCCAACATGGTACAATGGCTACACCACCAGCGCGTTCTTTCTGACGGTGCTCCTC
AGCGGGCCGCTGTTTGCCGCCCTGCTGCTGCGGCTGGCGAAAGTCGACTTTAACGGCTGGTTTTTTGCCGGACTGAGCGT
GGCCGCGCTGGTCATCAGCGCCGCAGTTATCATTATGCAAAGCGCCGGGCTCAGTACCCTTCACAGCTCGGTTCAGCAGG
CGGCCACCCTGCTGCCAGAATACGGCAAACTCCAGGCGCTACGCCTGGTACTGCTGGCGCTGGGCCTCGGCTGCTGGCTA
TGTCCGCTGATCCGCCGCCAGCCGCCGCGCGCTACGGGGCTGCTGATCGGCCTGCTGCTGGTCTTGATCGCCGAATGTAT
TGGCCGCGGCCTGTTTTATGGTCTGCATATGACCGTCGGTCTGGCGGTTGCCGGTTAA

Upstream 100 bases:

>100_bases
GCGCACTTTACCCGGCCGAGTATCGTTATCAAACCTAACGCCAATGCCCGGCCGTGTGGCGATACCACCGGTTACCTGGC
GAACCCGAAGGAGGTGTGAG

Downstream 100 bases:

>100_bases
TGAGACGGCGCGCAGGCGCGCGCCGCAGAAAGGAATAAGTGATGATGCCGATCCCAAATCGCGACGCCGTCGCGTTAAGC
GCCCGCACCCTGGGCGCGCT

Product: putative dimethyl sulfoxide reductase anchor subunit

Products: NA

Alternate protein names: DMSO reductase anchor subunit ynfH [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MGNGWHEWPLVLFTVLSQCVVGATIVSGLGWLALGDQREARRRLVRNMFFIWLLMGIGFLASVMHLGSPLRAFNSLNRIG
ASALSNEIASGALFFAVGGFWWLLAVLEKMPATLGKVWLAIAMLLGLLFVLAMTRVYQINTVPTWYNGYTTSAFFLTVLL
SGPLFAALLLRLAKVDFNGWFFAGLSVAALVISAAVIIMQSAGLSTLHSSVQQAATLLPEYGKLQALRLVLLALGLGCWL
CPLIRRQPPRATGLLIGLLLVLIAECIGRGLFYGLHMTVGLAVAG

Sequences:

>Translated_285_residues
MGNGWHEWPLVLFTVLSQCVVGATIVSGLGWLALGDQREARRRLVRNMFFIWLLMGIGFLASVMHLGSPLRAFNSLNRIG
ASALSNEIASGALFFAVGGFWWLLAVLEKMPATLGKVWLAIAMLLGLLFVLAMTRVYQINTVPTWYNGYTTSAFFLTVLL
SGPLFAALLLRLAKVDFNGWFFAGLSVAALVISAAVIIMQSAGLSTLHSSVQQAATLLPEYGKLQALRLVLLALGLGCWL
CPLIRRQPPRATGLLIGLLLVLIAECIGRGLFYGLHMTVGLAVAG
>Mature_284_residues
GNGWHEWPLVLFTVLSQCVVGATIVSGLGWLALGDQREARRRLVRNMFFIWLLMGIGFLASVMHLGSPLRAFNSLNRIGA
SALSNEIASGALFFAVGGFWWLLAVLEKMPATLGKVWLAIAMLLGLLFVLAMTRVYQINTVPTWYNGYTTSAFFLTVLLS
GPLFAALLLRLAKVDFNGWFFAGLSVAALVISAAVIIMQSAGLSTLHSSVQQAATLLPEYGKLQALRLVLLALGLGCWLC
PLIRRQPPRATGLLIGLLLVLIAECIGRGLFYGLHMTVGLAVAG

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. The C subunit anchors the other two subunits to the membrane and stabilize the catalytic subunits [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli dmsC [H]

Homologues:

Organism=Escherichia coli, GI1787873, Length=285, Percent_Identity=67.719298245614, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI1787123, Length=289, Percent_Identity=56.7474048442907, Blast_Score=284, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30788; Mature: 30657

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNGWHEWPLVLFTVLSQCVVGATIVSGLGWLALGDQREARRRLVRNMFFIWLLMGIGFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASVMHLGSPLRAFNSLNRIGASALSNEIASGALFFAVGGFWWLLAVLEKMPATLGKVWLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMLLGLLFVLAMTRVYQINTVPTWYNGYTTSAFFLTVLLSGPLFAALLLRLAKVDFNGW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FFAGLSVAALVISAAVIIMQSAGLSTLHSSVQQAATLLPEYGKLQALRLVLLALGLGCWL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
CPLIRRQPPRATGLLIGLLLVLIAECIGRGLFYGLHMTVGLAVAG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNGWHEWPLVLFTVLSQCVVGATIVSGLGWLALGDQREARRRLVRNMFFIWLLMGIGFL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASVMHLGSPLRAFNSLNRIGASALSNEIASGALFFAVGGFWWLLAVLEKMPATLGKVWLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMLLGLLFVLAMTRVYQINTVPTWYNGYTTSAFFLTVLLSGPLFAALLLRLAKVDFNGW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FFAGLSVAALVISAAVIIMQSAGLSTLHSSVQQAATLLPEYGKLQALRLVLLALGLGCWL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
CPLIRRQPPRATGLLIGLLLVLIAECIGRGLFYGLHMTVGLAVAG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]