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The map label for this gene is ydaA [H]

Identifier: 238894547

GI number: 238894547

Start: 2442988

End: 2443938

Strand: Reverse

Name: ydaA [H]

Synonym: KP1_2543

Alternate gene names: 238894547

Gene position: 2443938-2442988 (Counterclockwise)

Preceding gene: 238894548

Following gene: 238894543

Centisome position: 46.56

GC content: 58.04

Gene sequence:

>951_bases
ATGGCGAAGTATCAGAGCATGCTGGTAGTAATCGATCCTAACCAGGACGACCAGCCGGCGCTAAGGCGAGCGGTGTACCT
GCACCAACGGATTGGTGGACGCATCAAAGCCTTTTTACCGATCTATGATTTTTCCTATGAAATGACCACCCTGCTGTCGC
CGGACGAGCGGACGGCAATGCGCCAGGGCGTCATTGCCCAACGAACGGCCTGGATCCGCGAGCAGGCGAAATTCTACCTG
GAATCGGGCGTGCCGATTGACGTGAAAGTGGTGTGGCACAACCGTCCCTTCGAAGCGATTATTCAGGAGGTGGTCAGTGA
GAAACACGATCTGCTGCTGAAGATGGCCCACCAGCACGACAAACTGGAGGCGGTGATCTTTACCCCGACGGACTGGCATC
TGCTGCGTAAATGCCCTTGCCCGGTGTGGATGGTCAAAGACCAGCCGTGGCCGGAAGGCGGCAAAGCGCTGGTCGCCGTC
AATCTCGCCAGTGAAGAGAATTATCACAACACCCTTAACGAGAAGCTGGTTCGCGAGACGCTGTCGCTGGCGGAAGAAGT
CAACCACACTGAAGTGCACCTGATCGGTGCCTACCCGGTGACGCCGATCAATATCGCGATAGAACTGCCGGATTTTGATC
CCAGCGTCTACAACGACGCCATTCGCGGCCAGCATCTGCTGGCGATGAAAGCGCTGCGGCAGAAGTTTGGCATCGATGAA
AAATTCACCCACGTCGAAAAAGGACTGCCTGAAGAGGTGATCCCGGACCTCGCCGAGCATCTGCAGGCGGGGATCGTGGT
GCTGGGAACGGTCGGACGTACCGGCCTGTCGGCGGCGTTCCTCGGCAATACCGCGGAACAGGTTGTCGACCACCTGCGCT
GTGACCTGCTGGTGCTGAAACCGGAGGCCTACCAGACGCCGGTGGAACTGGACGACGACGACGACGATTAA

Upstream 100 bases:

>100_bases
AGATTTGTTGATCTGACCAGGCTCCTCCCCTGTTTCAATTCATCCATATAGGTTATCTTTTTAATAACTGACGGTAGCTG
CAGTTGTAAGGAGACCCTGT

Downstream 100 bases:

>100_bases
CCGCTACCACTCATCTTCCCCCGCCTCGCGGGGGATTTTTTTGCTTGCTGCCAGCCAGGCACAAAAAAAGGGCCGTTGGC
GGCCCCTGTCACTGTCCAGC

Product: universal stress protein UspE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MAKYQSMLVVIDPNQDDQPALRRAVYLHQRIGGRIKAFLPIYDFSYEMTTLLSPDERTAMRQGVIAQRTAWIREQAKFYL
ESGVPIDVKVVWHNRPFEAIIQEVVSEKHDLLLKMAHQHDKLEAVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKALVAV
NLASEENYHNTLNEKLVRETLSLAEEVNHTEVHLIGAYPVTPINIAIELPDFDPSVYNDAIRGQHLLAMKALRQKFGIDE
KFTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVVDHLRCDLLVLKPEAYQTPVELDDDDDD

Sequences:

>Translated_316_residues
MAKYQSMLVVIDPNQDDQPALRRAVYLHQRIGGRIKAFLPIYDFSYEMTTLLSPDERTAMRQGVIAQRTAWIREQAKFYL
ESGVPIDVKVVWHNRPFEAIIQEVVSEKHDLLLKMAHQHDKLEAVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKALVAV
NLASEENYHNTLNEKLVRETLSLAEEVNHTEVHLIGAYPVTPINIAIELPDFDPSVYNDAIRGQHLLAMKALRQKFGIDE
KFTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVVDHLRCDLLVLKPEAYQTPVELDDDDDD
>Mature_315_residues
AKYQSMLVVIDPNQDDQPALRRAVYLHQRIGGRIKAFLPIYDFSYEMTTLLSPDERTAMRQGVIAQRTAWIREQAKFYLE
SGVPIDVKVVWHNRPFEAIIQEVVSEKHDLLLKMAHQHDKLEAVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKALVAVN
LASEENYHNTLNEKLVRETLSLAEEVNHTEVHLIGAYPVTPINIAIELPDFDPSVYNDAIRGQHLLAMKALRQKFGIDEK
FTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVVDHLRCDLLVLKPEAYQTPVELDDDDDD

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=316, Percent_Identity=89.2405063291139, Blast_Score=599, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 35806; Mature: 35675

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYQSMLVVIDPNQDDQPALRRAVYLHQRIGGRIKAFLPIYDFSYEMTTLLSPDERTAM
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEECCCHHHHH
RQGVIAQRTAWIREQAKFYLESGVPIDVKVVWHNRPFEAIIQEVVSEKHDLLLKMAHQHD
HHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
KLEAVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKALVAVNLASEENYHNTLNEKLVRET
CEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
LSLAEEVNHTEVHLIGAYPVTPINIAIELPDFDPSVYNDAIRGQHLLAMKALRQKFGIDE
HHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCH
KFTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVVDHLRCDLLVLK
HHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCHHHHHHHHCCCEEEEC
PEAYQTPVELDDDDDD
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKYQSMLVVIDPNQDDQPALRRAVYLHQRIGGRIKAFLPIYDFSYEMTTLLSPDERTAM
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEECCCHHHHH
RQGVIAQRTAWIREQAKFYLESGVPIDVKVVWHNRPFEAIIQEVVSEKHDLLLKMAHQHD
HHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
KLEAVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKALVAVNLASEENYHNTLNEKLVRET
CEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
LSLAEEVNHTEVHLIGAYPVTPINIAIELPDFDPSVYNDAIRGQHLLAMKALRQKFGIDE
HHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCH
KFTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVVDHLRCDLLVLK
HHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCHHHHHHHHCCCEEEEC
PEAYQTPVELDDDDDD
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]