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The map label for this gene is ycjI [H]

Identifier: 238894372

GI number: 238894372

Start: 2264481

End: 2265188

Strand: Reverse

Name: ycjI [H]

Synonym: KP1_2354

Alternate gene names: 238894372

Gene position: 2265188-2264481 (Counterclockwise)

Preceding gene: 238894375

Following gene: 238894370

Centisome position: 43.16

GC content: 65.96

Gene sequence:

>708_bases
ATGTCTATTTCACGTCCTCGCCCGCAGCGCGGCGACTTTCCGCCGGGAACCCGGCAGTATGGCAGCTCGGAACTGGGCGC
GCCGCTGCTGTGGTTTCCTGCGCCGCAGGCCGACAGCCGTAGCGGGCTGATTATTGCCGGTACCCACGGTGATGAGAATT
CGTCGATTGTGACCCTCTCCTGCGCCCTGCGCACCCTGAAACCCGAGCTGCGCCGCCACCACGTGGTGCTGACGGTCAAT
CCTGACGGCTGTCAGCTCGGGCTGCGCGCCAATGCCCGCGGCGTTGACCTCAACCGTAACTTTCCGGCAGCCAACTGGAA
GCAAGGGGAAACGGTTTACCGCTGGAATAGCGCGGCGGCGGAGCGCGACGTGGTGCTGTTGACCGGCGAGCAGCCGGGTT
CGGAACGGGAGACCGAGGCCCTGTGTCAGTTGATCCATCAGATTCATCCGGCGTGGGTAGTCTCCTTTCACGATCCGCTG
GCCTGCATCGAAGATCCGGGCCACAGCCCGCTGGGTCGCTGGCTGGCCGACGCCTTCTCCCTGCCGCTGGTGGGCAGCGT
GGGCTACGACACGCCGGGCTCCTTTGGCAGCTGGTGCGCCGATATCGGACTCCCCTGCATCACCGCCGAGTTCCCGCCGG
TCTCCGCCGACGAGGCAACGGAGCGTTACCTGCCGGCGATGACCGATCTGCTGCGCTGGCAGGCTTAA

Upstream 100 bases:

>100_bases
AGAAAATTGATGTGCCGTCGGATTTCACGCCTCAGGGAATGGGTTTGATCCCGATACGCTTTTCGCCAACACTAAATAAT
AACGACACACAGGAAGCCCT

Downstream 100 bases:

>100_bases
AGATGAAGCACGCCGGTGCTGAACAGCAGCGCCGGCTCAACGTCCACCGCCAGCCATGTCGGGCCGTCGAGGTCAGCGAA
GCGCGCCAGCGGCGCCAGAG

Product: murein peptide amidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSISRPRPQRGDFPPGTRQYGSSELGAPLLWFPAPQADSRSGLIIAGTHGDENSSIVTLSCALRTLKPELRRHHVVLTVN
PDGCQLGLRANARGVDLNRNFPAANWKQGETVYRWNSAAAERDVVLLTGEQPGSERETEALCQLIHQIHPAWVVSFHDPL
ACIEDPGHSPLGRWLADAFSLPLVGSVGYDTPGSFGSWCADIGLPCITAEFPPVSADEATERYLPAMTDLLRWQA

Sequences:

>Translated_235_residues
MSISRPRPQRGDFPPGTRQYGSSELGAPLLWFPAPQADSRSGLIIAGTHGDENSSIVTLSCALRTLKPELRRHHVVLTVN
PDGCQLGLRANARGVDLNRNFPAANWKQGETVYRWNSAAAERDVVLLTGEQPGSERETEALCQLIHQIHPAWVVSFHDPL
ACIEDPGHSPLGRWLADAFSLPLVGSVGYDTPGSFGSWCADIGLPCITAEFPPVSADEATERYLPAMTDLLRWQA
>Mature_234_residues
SISRPRPQRGDFPPGTRQYGSSELGAPLLWFPAPQADSRSGLIIAGTHGDENSSIVTLSCALRTLKPELRRHHVVLTVNP
DGCQLGLRANARGVDLNRNFPAANWKQGETVYRWNSAAAERDVVLLTGEQPGSERETEALCQLIHQIHPAWVVSFHDPLA
CIEDPGHSPLGRWLADAFSLPLVGSVGYDTPGSFGSWCADIGLPCITAEFPPVSADEATERYLPAMTDLLRWQA

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510938, Length=234, Percent_Identity=79.9145299145299, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 25616; Mature: 25485

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISRPRPQRGDFPPGTRQYGSSELGAPLLWFPAPQADSRSGLIIAGTHGDENSSIVTLS
CCCCCCCCCCCCCCCCCHHCCCHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEE
CALRTLKPELRRHHVVLTVNPDGCQLGLRANARGVDLNRNFPAANWKQGETVYRWNSAAA
HHHHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
ERDVVLLTGEQPGSERETEALCQLIHQIHPAWVVSFHDPLACIEDPGHSPLGRWLADAFS
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHC
LPLVGSVGYDTPGSFGSWCADIGLPCITAEFPPVSADEATERYLPAMTDLLRWQA
CCEECCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISRPRPQRGDFPPGTRQYGSSELGAPLLWFPAPQADSRSGLIIAGTHGDENSSIVTLS
CCCCCCCCCCCCCCCCHHCCCHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEE
CALRTLKPELRRHHVVLTVNPDGCQLGLRANARGVDLNRNFPAANWKQGETVYRWNSAAA
HHHHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
ERDVVLLTGEQPGSERETEALCQLIHQIHPAWVVSFHDPLACIEDPGHSPLGRWLADAFS
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHC
LPLVGSVGYDTPGSFGSWCADIGLPCITAEFPPVSADEATERYLPAMTDLLRWQA
CCEECCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]