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The map label for this gene is yeaV [H]

Identifier: 238894050

GI number: 238894050

Start: 1950118

End: 1951560

Strand: Reverse

Name: yeaV [H]

Synonym: KP1_1997

Alternate gene names: 238894050

Gene position: 1951560-1950118 (Counterclockwise)

Preceding gene: 238894051

Following gene: 238894049

Centisome position: 37.18

GC content: 58.35

Gene sequence:

>1443_bases
CTGGTGCTGCTGGCGCTGGGACTGGTGTTGTATCTGGCCACCAGCAAATACGGCAATATCCGTCTCGGCGAAGGTAAAGT
CGAATACAGTACCCTCTCATGGCTGTTTATGTTTATCTGCGCCGGTCTCGGCTCCTCCACGCTGTACTGGGGCGTTGCCG
AATGGGCTTATTACTACCAGACCCCGGGCCTTAACATTGCCCCGCAATCGCCGAAAGCGCTGGAATACAGCATCCCTTAC
TCTTTCTTCCACTGGGGCGTAAGCGCTTGGGCAACCTATACCCTCGCCTCGCTGATCATGGCCTATCACTTCCACGTGCG
GAAAAATAAAGGCCTCAGCCTCTCCGGGATCGTTTCAGCGATCACCGGCGTTAATCCGCAGGGTTTCTGGGGCCGTCTGG
TCGATCTGATGTTCCTGATCGCTACCGTCGGCGCGTTAACCATTTCGCTGGTAGTCACCGCCGCCACCTTCACCCGCGGC
CTGTCAGCGCTGACCGGACTGCCGGATAACTTCACCGTGCAGGCATTTGTGATCCTGCTCTCCGGCGGTATTTTCTGCAT
GAGTTCGTGGATTGGCATCAACAACGGCCTGCAGCGCCTGAGCAAAATGGTCGGCTGGGGGGCGTTTCTGCTGCCGTTGG
TGGTATTACTGGTTGGCCCGACCGAATTCATCACCAATAACGTCATTAACGCCGTCGGCCTGACGACCCAAAACTTCCTG
CAGATGAGCCTGTTTACCGACCCGCTCGGCGACGGCGCCTTTACCCGCAACTGGACCGTCTTCTACTGGCTGTGGTGGAT
CTCCTACACCCCAGGCGTGGCGATGTTCGTCACCCGCGTCTCCCGCGGGCGCAAAATCAAAGAGGTGATCTGGGGACTGC
TCCTCGGTAGCACCGCCGGCTGCTGGTTTTTCTTCGGGGTGATGGAAAGCTACGCCATGCACCAGTTCGTTAACGGCGTG
ATTAACGTACCACAGGTGATGCAGACTCTCGGCGGCGAAACCGCCGTCCAGCAGGTCCTGATGTCGCTGCCGGCAGGTAA
GCTGTTCCTCGCCGCCTATCTGTTCGTGATGATTGTATTCCTCGCCTCGCACATGGATGCGGTGGCCTACACCATGGCGG
CGACCAGTACCCGCAACCTGCGCGAAGGCGAGGATCCGGATCGCGGCATGCGCCTGTTCTGGTGCGTGGTGATCACCCTC
ATCCCGCTGTCGATTCTGTTTACCGGCGCTTCGCTTGAGACCATGAAAACCACCGTGGTGCTGACCGCCCTACCGTTCCT
GGCCATTTTACTGATTAAAACCGGCGGCTTCGTGCGCTGGTTAAAACAGGACTACGCCCACGTTCCGGTCCATCAGATAG
AAACCCATACCCCCGAGCCCATTATTAAAGCCGAGACGCTGCCGGTTGGCGCGGTACTCAAAGGCGACGGCCAGTCGCTG
TAA

Upstream 100 bases:

>100_bases
CATCGCCGCTACATTAAGTCTCTTCCCCCAGCAAACCGCGCAGGCAGCTGATTCGATTTTTAACGGCGTGACCCGCCTGC
TGGGTTCCACGGTACAGGTA

Downstream 100 bases:

>100_bases
AACCTCTTACTGACAATAATCACAAGGAGACCCTACATGAGCAATTTGAGCCCTGACTTCACCCTGCCGATTAACTTTTG
CGCTAATCCGCAGGATGCCT

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVLLALGLVLYLATSKYGNIRLGEGKVEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPQSPKALEYSIPY
SFFHWGVSAWATYTLASLIMAYHFHVRKNKGLSLSGIVSAITGVNPQGFWGRLVDLMFLIATVGALTISLVVTAATFTRG
LSALTGLPDNFTVQAFVILLSGGIFCMSSWIGINNGLQRLSKMVGWGAFLLPLVVLLVGPTEFITNNVINAVGLTTQNFL
QMSLFTDPLGDGAFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLLLGSTAGCWFFFGVMESYAMHQFVNGV
INVPQVMQTLGGETAVQQVLMSLPAGKLFLAAYLFVMIVFLASHMDAVAYTMAATSTRNLREGEDPDRGMRLFWCVVITL
IPLSILFTGASLETMKTTVVLTALPFLAILLIKTGGFVRWLKQDYAHVPVHQIETHTPEPIIKAETLPVGAVLKGDGQSL

Sequences:

>Translated_480_residues
MVLLALGLVLYLATSKYGNIRLGEGKVEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPQSPKALEYSIPY
SFFHWGVSAWATYTLASLIMAYHFHVRKNKGLSLSGIVSAITGVNPQGFWGRLVDLMFLIATVGALTISLVVTAATFTRG
LSALTGLPDNFTVQAFVILLSGGIFCMSSWIGINNGLQRLSKMVGWGAFLLPLVVLLVGPTEFITNNVINAVGLTTQNFL
QMSLFTDPLGDGAFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLLLGSTAGCWFFFGVMESYAMHQFVNGV
INVPQVMQTLGGETAVQQVLMSLPAGKLFLAAYLFVMIVFLASHMDAVAYTMAATSTRNLREGEDPDRGMRLFWCVVITL
IPLSILFTGASLETMKTTVVLTALPFLAILLIKTGGFVRWLKQDYAHVPVHQIETHTPEPIIKAETLPVGAVLKGDGQSL
>Mature_480_residues
MVLLALGLVLYLATSKYGNIRLGEGKVEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPQSPKALEYSIPY
SFFHWGVSAWATYTLASLIMAYHFHVRKNKGLSLSGIVSAITGVNPQGFWGRLVDLMFLIATVGALTISLVVTAATFTRG
LSALTGLPDNFTVQAFVILLSGGIFCMSSWIGINNGLQRLSKMVGWGAFLLPLVVLLVGPTEFITNNVINAVGLTTQNFL
QMSLFTDPLGDGAFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLLLGSTAGCWFFFGVMESYAMHQFVNGV
INVPQVMQTLGGETAVQQVLMSLPAGKLFLAAYLFVMIVFLASHMDAVAYTMAATSTRNLREGEDPDRGMRLFWCVVITL
IPLSILFTGASLETMKTTVVLTALPFLAILLIKTGGFVRWLKQDYAHVPVHQIETHTPEPIIKAETLPVGAVLKGDGQSL

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=480, Percent_Identity=88.3333333333333, Blast_Score=874, Evalue=0.0,
Organism=Escherichia coli, GI1786224, Length=448, Percent_Identity=29.2410714285714, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1786506, Length=461, Percent_Identity=27.3318872017354, Blast_Score=169, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 52751; Mature: 52751

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLALGLVLYLATSKYGNIRLGEGKVEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQ
CHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEE
TPGLNIAPQSPKALEYSIPYSFFHWGVSAWATYTLASLIMAYHFHVRKNKGLSLSGIVSA
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ITGVNPQGFWGRLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SGGIFCMSSWIGINNGLQRLSKMVGWGAFLLPLVVLLVGPTEFITNNVINAVGLTTQNFL
HCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
QMSLFTDPLGDGAFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLLLGSTAG
HHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHH
CWFFFGVMESYAMHQFVNGVINVPQVMQTLGGETAVQQVLMSLPAGKLFLAAYLFVMIVF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LASHMDAVAYTMAATSTRNLREGEDPDRGMRLFWCVVITLIPLSILFTGASLETMKTTVV
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LTALPFLAILLIKTGGFVRWLKQDYAHVPVHQIETHTPEPIIKAETLPVGAVLKGDGQSL
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCCCCCEEECCCCCCEEECCCCCCC
>Mature Secondary Structure
MVLLALGLVLYLATSKYGNIRLGEGKVEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQ
CHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEE
TPGLNIAPQSPKALEYSIPYSFFHWGVSAWATYTLASLIMAYHFHVRKNKGLSLSGIVSA
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ITGVNPQGFWGRLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SGGIFCMSSWIGINNGLQRLSKMVGWGAFLLPLVVLLVGPTEFITNNVINAVGLTTQNFL
HCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
QMSLFTDPLGDGAFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLLLGSTAG
HHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHH
CWFFFGVMESYAMHQFVNGVINVPQVMQTLGGETAVQQVLMSLPAGKLFLAAYLFVMIVF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LASHMDAVAYTMAATSTRNLREGEDPDRGMRLFWCVVITLIPLSILFTGASLETMKTTVV
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LTALPFLAILLIKTGGFVRWLKQDYAHVPVHQIETHTPEPIIKAETLPVGAVLKGDGQSL
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCCCCCEEECCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]