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The map label for this gene is yccV

Identifier: 238894021

GI number: 238894021

Start: 1920199

End: 1920516

Strand: Reverse

Name: yccV

Synonym: KP1_1967

Alternate gene names: 238894021

Gene position: 1920516-1920199 (Counterclockwise)

Preceding gene: 238894022

Following gene: 238894019

Centisome position: 36.59

GC content: 58.81

Gene sequence:

>318_bases
ATGATAGCCAGCAAATTCGGTATCGGCCAACAGGTCCGCCATACGCTCTTGGGCTACCTGGGCGTCATCGTCGATGTCGA
TCCCGAGTATTCGCTCGCGGAGCCGGAAGAGGATGAAATTGCCGCCAATGACGAACTGCGCGCGGCGCCCTGGTACCATG
TGGTGATGGAAGATGATGATGGCCAGCCGATTCACACCTATCTGGCAGAAGCGCAGCTGAGCAGCGAAACCCGCGACGAA
CACCCGGAACAGCCGTCCCTTGACGAACTGGCCAAAACGATTCGTCAGCAGCTGCAGGCTCCGCGCCTTCGCAACTAA

Upstream 100 bases:

>100_bases
AAGGGCTGTATCTGAAGGGGTTTGCCTGTCGCGTCATGTAACTTGAAAAACGAAACATGAGCCTCATATAGGGAGTATTC
ATGTTTCCCAGGAGGTGCCT

Downstream 100 bases:

>100_bases
AATAAAACCCCGCTAACGCGGGGTTTTATTTTATTTCGCCAACCCTAGTCGCGGTAGTTCAATGGCCGGGCAGCGATCCA
TCACTACGCTCAATCCGGCT

Product: heat shock protein HspQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MIASKFGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELRAAPWYHVVMEDDDGQPIHTYLAEAQLSSETRDE
HPEQPSLDELAKTIRQQLQAPRLRN

Sequences:

>Translated_105_residues
MIASKFGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELRAAPWYHVVMEDDDGQPIHTYLAEAQLSSETRDE
HPEQPSLDELAKTIRQQLQAPRLRN
>Mature_105_residues
MIASKFGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELRAAPWYHVVMEDDDGQPIHTYLAEAQLSSETRDE
HPEQPSLDELAKTIRQQLQAPRLRN

Specific function: Involved in the degradation of certain denaturated proteins, including dnaA, during heat shock stress

COG id: COG3785

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hspQ family

Homologues:

Organism=Escherichia coli, GI145693110, Length=105, Percent_Identity=83.8095238095238, Blast_Score=190, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HSPQ_KLEP3 (B5XY39)

Other databases:

- EMBL:   CP000964
- RefSeq:   YP_002239394.1
- ProteinModelPortal:   B5XY39
- SMR:   B5XY39
- GeneID:   6938467
- GenomeReviews:   CP000964_GR
- KEGG:   kpe:KPK_3574
- HOGENOM:   HBG623734
- OMA:   GQQVRHK
- ProtClustDB:   PRK14129
- GO:   GO:0005737
- HAMAP:   MF_01194
- InterPro:   IPR011722
- InterPro:   IPR022866
- TIGRFAMs:   TIGR02097

Pfam domain/function: PF08755 YccV-like

EC number: NA

Molecular weight: Translated: 11881; Mature: 11881

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASKFGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELRAAPWYHVVMEDDD
CCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
GQPIHTYLAEAQLSSETRDEHPEQPSLDELAKTIRQQLQAPRLRN
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIASKFGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELRAAPWYHVVMEDDD
CCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
GQPIHTYLAEAQLSSETRDEHPEQPSLDELAKTIRQQLQAPRLRN
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA