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The map label for this gene is ybiI [H]

Identifier: 238893857

GI number: 238893857

Start: 1729295

End: 1729561

Strand: Reverse

Name: ybiI [H]

Synonym: KP1_1789

Alternate gene names: 238893857

Gene position: 1729561-1729295 (Counterclockwise)

Preceding gene: 238893858

Following gene: 238893856

Centisome position: 32.95

GC content: 56.55

Gene sequence:

>267_bases
ATGGCATCAGGTTGGGCAGGCGACGGCGCCGTACAGGATCAGATCGACAGCACTATTGACGATGCGGTGGCTCGCGCCCG
CCGCGAGCTTCCGCGCGGCGAAAGCAACAAATTTTGTGATGAATGCGGAGAGCCGATTCCGGAGGCCCGTCGACAGGCCA
TCCCAGGGGTCAGATACTGCGTGAAGTGCCAGCAGGAGAAAGATTTACATAACAATACATTTTCAGGATATAATCGTCGC
GGATCCAAGGACAGCCAGCTACGCTGA

Upstream 100 bases:

>100_bases
GTCATGGGGCGATAGCCTGGCGGATCAATGCCGCCAGCAGCGGTAACCGGCTGTACGGTTCAGCTATAATTTATCAATAA
CCTTTTACAGGAGGCAGACG

Downstream 100 bases:

>100_bases
CTTTCCTTTACCGATTATGACAGCCTTTCGCATTATCTTTTCGCGCACATTTTTTGGCGGAAAAAGTCGCAATATGTGCC
CTTAAACGCGTCGGTCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MASGWAGDGAVQDQIDSTIDDAVARARRELPRGESNKFCDECGEPIPEARRQAIPGVRYCVKCQQEKDLHNNTFSGYNRR
GSKDSQLR

Sequences:

>Translated_88_residues
MASGWAGDGAVQDQIDSTIDDAVARARRELPRGESNKFCDECGEPIPEARRQAIPGVRYCVKCQQEKDLHNNTFSGYNRR
GSKDSQLR
>Mature_87_residues
ASGWAGDGAVQDQIDSTIDDAVARARRELPRGESNKFCDECGEPIPEARRQAIPGVRYCVKCQQEKDLHNNTFSGYNRRG
SKDSQLR

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1787022, Length=88, Percent_Identity=71.5909090909091, Blast_Score=135, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 9828; Mature: 9697

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGWAGDGAVQDQIDSTIDDAVARARRELPRGESNKFCDECGEPIPEARRQAIPGVRYC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCHHHHH
VKCQQEKDLHNNTFSGYNRRGSKDSQLR
HHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASGWAGDGAVQDQIDSTIDDAVARARRELPRGESNKFCDECGEPIPEARRQAIPGVRYC
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCHHHHH
VKCQQEKDLHNNTFSGYNRRGSKDSQLR
HHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]