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The map label for this gene is ybiJ [H]

Identifier: 238893856

GI number: 238893856

Start: 1728749

End: 1729009

Strand: Reverse

Name: ybiJ [H]

Synonym: KP1_1788

Alternate gene names: 238893856

Gene position: 1729009-1728749 (Counterclockwise)

Preceding gene: 238893857

Following gene: 238893847

Centisome position: 32.94

GC content: 53.26

Gene sequence:

>261_bases
ATGAAAAACATCAAATATGCTGCCGCTGCCATCGCTCTGACCGCTCTTTCCTTCGGCGCCTTTGCCGCCGAACCGGTTAC
CCCCGCTCAGGCTGAAAGCATGAATAAGATCGGCGTGGTGTCTGCGCAAGGCGCAACCACTTTAGATGGTCTGGAAGCAA
AACTGGCTGCTAAAGCCGAAGCCGCTGGCGCGACCGGCTACAGCATTACTTCCGCTAACACCAACAACAAACTGAGCGGT
ACTGCGGTTATCTATAAATAA

Upstream 100 bases:

>100_bases
TGTGAATTTCCTTCGATTTTATCTCCCGCAGAAAAGCGTGATACTTATCACATCGACGGAACATCGTCCCCTGAACAGAA
CAACCTGCGAGAGATTAACT

Downstream 100 bases:

>100_bases
TCGCTGCACCCATCTGTAAGCCACTGAATTAACCCTGAAAAGACCTTTAATACCCTTGCCTTGCCCGTCCGAGCCACCGG
ACGGGCTTTTTTTTATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKNIKYAAAAIALTALSFGAFAAEPVTPAQAESMNKIGVVSAQGATTLDGLEAKLAAKAEAAGATGYSITSANTNNKLSG
TAVIYK

Sequences:

>Translated_86_residues
MKNIKYAAAAIALTALSFGAFAAEPVTPAQAESMNKIGVVSAQGATTLDGLEAKLAAKAEAAGATGYSITSANTNNKLSG
TAVIYK
>Mature_86_residues
MKNIKYAAAAIALTALSFGAFAAEPVTPAQAESMNKIGVVSAQGATTLDGLEAKLAAKAEAAGATGYSITSANTNNKLSG
TAVIYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI1787021, Length=86, Percent_Identity=75.5813953488372, Blast_Score=105, Evalue=5e-25,
Organism=Escherichia coli, GI1787355, Length=88, Percent_Identity=47.7272727272727, Blast_Score=68, Evalue=1e-13,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=43.0232558139535, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 8550; Mature: 8550

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKYAAAAIALTALSFGAFAAEPVTPAQAESMNKIGVVSAQGATTLDGLEAKLAAKAE
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCC
AAGATGYSITSANTNNKLSGTAVIYK
CCCCCCEEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MKNIKYAAAAIALTALSFGAFAAEPVTPAQAESMNKIGVVSAQGATTLDGLEAKLAAKAE
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCC
AAGATGYSITSANTNNKLSGTAVIYK
CCCCCCEEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]