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The map label for this gene is ybgS [H]

Identifier: 238893782

GI number: 238893782

Start: 1651464

End: 1651829

Strand: Reverse

Name: ybgS [H]

Synonym: KP1_1709

Alternate gene names: 238893782

Gene position: 1651829-1651464 (Counterclockwise)

Preceding gene: 238893784

Following gene: 238893781

Centisome position: 31.47

GC content: 57.1

Gene sequence:

>366_bases
ATGAATATGAAAAAACTGACGACCCTTTTGCTCACCGCCACCTTAGGTCTTGCCAGCGGCGCGGCCCTGGCGGCAGACAC
CGGCGCCCAGTCCAATAATGGCCAGGCCAACTCTTCCGCGGATGCCGGTCAGGTGGCGCCGGATGCCCGTGAGAACGTGG
CGCCGAACAACGTGGACAATAGTCAGATCAACTCTGGCTCTGGGGGCACCACGGGCTCGACGATGACCCAGGATAATATG
TCGAGCAATGAGGTACATAAAAACTCGATGTGTAAAGACGGCCGCTGTCCGGACACCGGTAAAAAACTGGACAACGGTGG
CAATACGACCCAAGACAACAGCAAAACCGACGGCACCACCCAGTAA

Upstream 100 bases:

>100_bases
CTGCGATCGTCTGCGGAGTCTTAAACCATAGCGAGTCAGATCCCTGGCACACTCACCGCGGGAAGCGCATTTCCCCTTCC
CGGCTTAACAGGAGTATCCG

Downstream 100 bases:

>100_bases
CACATGAGGTGGGCAGATCGAAGAAAAGGCGAGCCGGTCTCGCCTTTTCTTCGTTTTTTATCGCTCTCTGTTTATGATGT
CATAGCGTAATAATGATAAC

Product: putative homeobox protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNMKKLTTLLLTATLGLASGAALAADTGAQSNNGQANSSADAGQVAPDARENVAPNNVDNSQINSGSGGTTGSTMTQDNM
SSNEVHKNSMCKDGRCPDTGKKLDNGGNTTQDNSKTDGTTQ

Sequences:

>Translated_121_residues
MNMKKLTTLLLTATLGLASGAALAADTGAQSNNGQANSSADAGQVAPDARENVAPNNVDNSQINSGSGGTTGSTMTQDNM
SSNEVHKNSMCKDGRCPDTGKKLDNGGNTTQDNSKTDGTTQ
>Mature_121_residues
MNMKKLTTLLLTATLGLASGAALAADTGAQSNNGQANSSADAGQVAPDARENVAPNNVDNSQINSGSGGTTGSTMTQDNM
SSNEVHKNSMCKDGRCPDTGKKLDNGGNTTQDNSKTDGTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786968, Length=126, Percent_Identity=68.2539682539683, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020363
- ProDom:   PD079292 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12235; Mature: 12235

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKKLTTLLLTATLGLASGAALAADTGAQSNNGQANSSADAGQVAPDARENVAPNNVDN
CCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQINSGSGGTTGSTMTQDNMSSNEVHKNSMCKDGRCPDTGKKLDNGGNTTQDNSKTDGTT
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q
C
>Mature Secondary Structure
MNMKKLTTLLLTATLGLASGAALAADTGAQSNNGQANSSADAGQVAPDARENVAPNNVDN
CCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQINSGSGGTTGSTMTQDNMSSNEVHKNSMCKDGRCPDTGKKLDNGGNTTQDNSKTDGTT
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]