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The map label for this gene is ybfM [H]

Identifier: 238893731

GI number: 238893731

Start: 1599243

End: 1600187

Strand: Direct

Name: ybfM [H]

Synonym: KP1_1655

Alternate gene names: 238893731

Gene position: 1599243-1600187 (Clockwise)

Preceding gene: 238893729

Following gene: 238893732

Centisome position: 30.47

GC content: 54.92

Gene sequence:

>945_bases
ATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATTGCCGCCGTCACCGCGATGTCGGGCTGGGTTGTTGC
TCCACAGGCCAGCGCAGCAGGCTTTATCGATGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAGCGTGACC
GTAAAGATGTGACCGACGGCGACAAATACAAAACCAACCTTTCCCACTCCACCTGGAACGCCAACCTGGACTTCCAGTCC
GGCTATGCCGCCGATATGTTTGGCCTTGATATTGCCGCGTTTACCGCGATTGAAATGGCGGAGAACGGCGATAGCGGTCA
CCCGAACGAAATTGCCTTCTCGTCACGTAACAAAGCCTATGACGAAGACTATTCCGGCGATAAGAGCGGCATCAGCCTGT
ATAAAGCCGCAGCGAAATTCAAATATGGTCCGGCGTGGGCACGTGCGGGCTATATCCAGCCAACCGGCCAGACTCTGCTG
GCCCCGCACTGGAGTTTTATGCCAGGTACCTATCAGGGGGCGGAGGCCGGGGCTAACTTCGACTATGGCACGGCGGGCGC
GTTAAGTTTCTCCTATATGTGGACGAACGAGTATAAAGCGCCATGGCATATCGAGATGGACGATTTCTATCAGAACGATA
AGAAGACCAAAGTCGATTACCTCCACTCCGTCGGCGCTAAATATGATTTCAAAAATGACCTGGTGCTGGAGGCGGCATTT
GGTCAGGCTCAGGGCTATATCGATCAGTACTTTGCTAAAGCCAGCTACAAGTTTGACGTCGCCGGCGCGCCGCTGAGCAC
CAGCTACCAGTTCTACGGCACCCGCGATAAGGTCAGCAACGGCGGGGTCAACGACATCTATGATGGCACCGCATGGCTGC
AGGCGTTACCTTTGGTTATAAGGTGGCGGATGTCCTGGATCTGCGTCTCGAGGGAACCTGGGTGA

Upstream 100 bases:

>100_bases
TTCGCGGTCTTTTTTACCGCCCCACATTTTGCAGTTTTATTTATTTTTTAGCGATTGACCGCTGGTCTTCGCCTTTTAAA
ACGTCAAAGAGGATATGCAC

Downstream 100 bases:

>100_bases
AGGCTGATGGCCAGCAGGGCTACTTCCTGCAGCGTATGACCCCGACCTACGCCTCTTCCAATGGTCGTCTCGATATCTGG
TGGGATAACCGCTCCGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQS
GYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAYDEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALPLVIRWRMSWICVSREPG

Sequences:

>Translated_314_residues
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQS
GYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAYDEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALPLVIRWRMSWICVSREPG
>Mature_314_residues
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQS
GYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAYDEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALPLVIRWRMSWICVSREPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786897, Length=301, Percent_Identity=89.0365448504983, Blast_Score=552, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005318 [H]

Pfam domain/function: PF03573 OprD [H]

EC number: NA

Molecular weight: Translated: 34798; Mature: 34798

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDG
CCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCCCC
DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAY
CCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
DEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF
CCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
DYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
CCCCCCEEEEEEEEECCCCCCEEEEHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECC
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALPLVI
CCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
RWRMSWICVSREPG
EEEEEEEEEECCCC
>Mature Secondary Structure
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDG
CCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCCCC
DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAY
CCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
DEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF
CCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
DYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
CCCCCCEEEEEEEEECCCCCCEEEEHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECC
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALPLVI
CCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
RWRMSWICVSREPG
EEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]