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The map label for this gene is ybfM [H]

Identifier: 238893732

GI number: 238893732

Start: 1600145

End: 1600645

Strand: Direct

Name: ybfM [H]

Synonym: KP1_1656

Alternate gene names: 238893732

Gene position: 1600145-1600645 (Clockwise)

Preceding gene: 238893731

Following gene: 238893733

Centisome position: 30.49

GC content: 55.69

Gene sequence:

>501_bases
GTGGCGGATGTCCTGGATCTGCGTCTCGAGGGAACCTGGGTGAAGGCTGATGGCCAGCAGGGCTACTTCCTGCAGCGTAT
GACCCCGACCTACGCCTCTTCCAATGGTCGTCTCGATATCTGGTGGGATAACCGCTCCGACTTTAACGCCAACGGCGAAA
AAGCGGTCTTCTTTGGCGCGATGTATGACATGAAAAACTGGGATATGCCGGGCTGGGCGTTCGGCGCGTCTTATGTCTAC
GCCTGGGATGCGAAGCCGGGAAGAATGTCCTCTCCGGATGCGTACTATGACCCTGACTATCGCCTGAAAGAGTCGGCCTA
TAGCCTGGATGCAATGTATACCGTACAGGAAGGGCGGGCGAAGGGCACCCTGTTCAAACTGCACTTTACCCAATACGACA
ACCATTCCGATATTCCGAGCTGGAGCGGCGGCTACGGCAACATCTTCCAGGATGAGCGCGACGTGAAGTTCATGGTTATC
GCCCCGTTCACTATTTTCTGA

Upstream 100 bases:

>100_bases
GCTACCAGTTCTACGGCACCCGCGATAAGGTCAGCAACGGCGGGGTCAACGACATCTATGATGGCACCGCATGGCTGCAG
GCGTTACCTTTGGTTATAAG

Downstream 100 bases:

>100_bases
TGCCTGCGCGGCGGGCGTGAGCCTGCCGCACCTCTGGGAGAACGACAATGAAAAAAATGCTGCTTATTGCCATGATGGCA
GCGGGCCTGGTGGCCTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDMKNWDMPGWAFGASYVY
AWDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGRAKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVI
APFTIF

Sequences:

>Translated_166_residues
MADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDMKNWDMPGWAFGASYVY
AWDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGRAKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVI
APFTIF
>Mature_165_residues
ADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDMKNWDMPGWAFGASYVYA
WDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGRAKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIA
PFTIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786897, Length=166, Percent_Identity=86.144578313253, Blast_Score=303, Evalue=4e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005318 [H]

Pfam domain/function: PF03573 OprD [H]

EC number: NA

Molecular weight: Translated: 19155; Mature: 19024

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGA
CCCEEEEEEECEEEEECCCCCEEEEECCCCEECCCCEEEEEECCCCCCCCCCCEEEEEEE
MYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGRA
EECCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
KGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEC
>Mature Secondary Structure 
ADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGA
CCEEEEEEECEEEEECCCCCEEEEECCCCEECCCCEEEEEECCCCCCCCCCCEEEEEEE
MYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGRA
EECCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
KGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]