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The map label for this gene is ybbJ [H]

Identifier: 238893454

GI number: 238893454

Start: 1299073

End: 1299531

Strand: Reverse

Name: ybbJ [H]

Synonym: KP1_1345

Alternate gene names: 238893454

Gene position: 1299531-1299073 (Counterclockwise)

Preceding gene: 238893455

Following gene: 238893452

Centisome position: 24.76

GC content: 67.1

Gene sequence:

>459_bases
ATGATCGGCATGATCCTCGCACACCCCCATCTGTTCTGGCTAAGCCTCGGCGGGCTGCTGCTGGCGGCCGAGATGCTGGG
CGGCAGCGGATACCTGCTGTGGAGCGGCGTCGCCGGCGTGGTGACCGGCGCCCTGACCTGGCTCCTGCCGCTGAGCTGGG
AATGGCAAGGCACGCTGTTTGCCGTTCTCACCCTGCTGGCGGCGTGGCTGTGGTCGAAATGGCTGCGCAAGCGCGTCAAA
ACGCAGCGCCCGGCCGATGCCCAGCTCAACCAGCGCGGGCAGCAACTGGTGGGCCGCCGCCTGACGCTGGATGCCCCGCT
GGTGAACGGCCGCGGCCACGTCCGCGTGGGCGACAGCTCCTGGCCGGTGATTGCCGATGAAGACTTCGCGGCGGGCAGCA
AGGTTGAAGTGATTGCCGTAGAAGGGATTACGCTACGAATCAGACCCGCCGTCCGTTAA

Upstream 100 bases:

>100_bases
GCAAAGTGGTATTGATGCCGCTGGATGCCAGCAGCCTGATGGGATCGATCGCCGGGATCAGCGAGCTGATCAAAGAAGGC
GCTGGCGATCGGAAAAAATC

Downstream 100 bases:

>100_bases
GCCTGCGCCTTGCGATGGCAGCAGCCGGAAAGATTATCGATAATCGGGCACTCCGCGCTGTCGTCGCCGGGGCAGGATTC
GGCCAGCGCCAGCAGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIGMILAHPHLFWLSLGGLLLAAEMLGGSGYLLWSGVAGVVTGALTWLLPLSWEWQGTLFAVLTLLAAWLWSKWLRKRVK
TQRPADAQLNQRGQQLVGRRLTLDAPLVNGRGHVRVGDSSWPVIADEDFAAGSKVEVIAVEGITLRIRPAVR

Sequences:

>Translated_152_residues
MIGMILAHPHLFWLSLGGLLLAAEMLGGSGYLLWSGVAGVVTGALTWLLPLSWEWQGTLFAVLTLLAAWLWSKWLRKRVK
TQRPADAQLNQRGQQLVGRRLTLDAPLVNGRGHVRVGDSSWPVIADEDFAAGSKVEVIAVEGITLRIRPAVR
>Mature_152_residues
MIGMILAHPHLFWLSLGGLLLAAEMLGGSGYLLWSGVAGVVTGALTWLLPLSWEWQGTLFAVLTLLAAWLWSKWLRKRVK
TQRPADAQLNQRGQQLVGRRLTLDAPLVNGRGHVRVGDSSWPVIADEDFAAGSKVEVIAVEGITLRIRPAVR

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=148, Percent_Identity=71.6216216216216, Blast_Score=207, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16656; Mature: 16656

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGMILAHPHLFWLSLGGLLLAAEMLGGSGYLLWSGVAGVVTGALTWLLPLSWEWQGTLF
CCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHH
AVLTLLAAWLWSKWLRKRVKTQRPADAQLNQRGQQLVGRRLTLDAPLVNGRGHVRVGDSS
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCEECCCCEEEECCCC
WPVIADEDFAAGSKVEVIAVEGITLRIRPAVR
CCEEECCCCCCCCEEEEEEECCEEEEEECCCC
>Mature Secondary Structure
MIGMILAHPHLFWLSLGGLLLAAEMLGGSGYLLWSGVAGVVTGALTWLLPLSWEWQGTLF
CCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHH
AVLTLLAAWLWSKWLRKRVKTQRPADAQLNQRGQQLVGRRLTLDAPLVNGRGHVRVGDSS
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCEECCCCEEEECCCC
WPVIADEDFAAGSKVEVIAVEGITLRIRPAVR
CCEEECCCCCCCCEEEEEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]