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The map label for this gene is yajR [H]

Identifier: 238893365

GI number: 238893365

Start: 1203685

End: 1205049

Strand: Reverse

Name: yajR [H]

Synonym: KP1_1247

Alternate gene names: 238893365

Gene position: 1205049-1203685 (Counterclockwise)

Preceding gene: 238893366

Following gene: 238893363

Centisome position: 22.96

GC content: 61.1

Gene sequence:

>1365_bases
ATGAACGATAACAAAATGACGCCAGGGGAACTGCGCGCGACCTGGGGTTTGGGGACAGTATTCTCCCTGCGCATGCTTGG
CATGTTTATGGTCCTGCCGGTTCTGACCACGTATGGCATGGCGTTGCAGGGTGCCAGTGAAGCGCTGATTGGCCTGGCGA
TCGGTATCTACGGCCTGGCGCAGGCGGTGTTCCAGATCCCCTTCGGACTGTTATCTGACCGTATTGGCCGTAAGCCATTG
ATCGTCGGCGGCCTGCTTATCTTCGTGCTCGGCAGCGTCATCGCCGCGCTCACCGACTCCATCTGGGGCATCATTCTTGG
CCGCGCCCTGCAGGGCTCCGGCGCCATCGCCGCCGCGGTTATGGCCCTGCTGTCCGATCTCACCCGCGAACAGAACCGCA
CCAAAGCGATGGCCTTTATCGGCGTCAGCTTCGGCGTCACCTTCGCCATCGCCATGGTGCTGGGGCCGATTGTCACCCAC
CAGCTGGGTCTGCACGCGCTGTTCTGGATGATCGCCATCCTGGCGACCGTCGGCATCCTGCTCACCCTGTGGGTGGTGCC
CAACAGCCATAACCATGTCCTTAACCGCGAATCCGGGATGGTGAAGGGCTGCTTTAGCAAGGTGCTGGCGGAGCCGCGCC
TGCTGAAGCTTAACTTTGGCATCATGTGCCTGCACATTATGCTGATGTCCACTTTTGTCGCCCTGCCCGGACAACTGGAG
GCCGCCGGCTTCCCGGCCGCCGAGCACTGGAAGATTTACCTGGTCACCATGGTTATCTCGTTCATCTCGGTGGTGCCGTT
TATCATCTACGCCGAAGTGAAGCGCAAGATGAAGCGCGTCTTCCTGCTCTGCGTCGCCATCCTGCTGATTGCGGAAATTG
TCCTCTGGGGCGCCGGAGGCTACTTCTGGGAGCTGGTGGCGGGCGTTCAGCTCTTCTTCCTGGCGTTTAACCTGCTGGAA
GCGCTGTTGCCGTCGCTAATTAGCAAGGAGTCTCCGGCGGGCTACAAAGGCACCGCGATGGGCGTCTACTCCACCAGCCA
GTTTCTCGGCGTGGCGATTGGCGGCGCGCTTGGCGGCTGGGTCGATGGTTTCTTTGATTCGCAAACCGTGTTTCTGCTGG
GCGCCCTGCTGGCGATGCTGTGGCTGCTGGTGGCCAGCACCATGAGCGAGCCGCCGTACGTCAGCAGCCTGCGGGTGGAG
GTGCCGGACGGCGTGGTGGTCGACAGCGCGCTGCAGGCGCGTCTGCTGAGCGCCAGCGGGGTTCATCAGGCGCTGGTGGT
ACCCGAGGAGCGTTCGGTGTATATCAAAATCGACAGCAAGGTCACCAACCGCTTCGAGATAGAGCAGCTCATCAAAGGAG
TATAA

Upstream 100 bases:

>100_bases
GCATCGCGCAACAGCCCCGTAATATCTGTTAAACAAACATTTATTTACGCTTCTTACCCCCCGCCGCTACACTAGGCGCA
GTTTTTATATTGAGGTGGTA

Downstream 100 bases:

>100_bases
AAAAAGCGGGGAATTCCCCGCTTTTTGCTGTCTGCCCGCCGCCTTAGTCGCGGAAGTTTTTGAACTGGAACGGCTGTCCC
AGATCGCCACCGCGCACCAG

Product: hypothetical major facilitator family transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNDNKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLAQAVFQIPFGLLSDRIGRKPL
IVGGLLIFVLGSVIAALTDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVLGPIVTH
QLGLHALFWMIAILATVGILLTLWVVPNSHNHVLNRESGMVKGCFSKVLAEPRLLKLNFGIMCLHIMLMSTFVALPGQLE
AAGFPAAEHWKIYLVTMVISFISVVPFIIYAEVKRKMKRVFLLCVAILLIAEIVLWGAGGYFWELVAGVQLFFLAFNLLE
ALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGALGGWVDGFFDSQTVFLLGALLAMLWLLVASTMSEPPYVSSLRVE
VPDGVVVDSALQARLLSASGVHQALVVPEERSVYIKIDSKVTNRFEIEQLIKGV

Sequences:

>Translated_454_residues
MNDNKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLAQAVFQIPFGLLSDRIGRKPL
IVGGLLIFVLGSVIAALTDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVLGPIVTH
QLGLHALFWMIAILATVGILLTLWVVPNSHNHVLNRESGMVKGCFSKVLAEPRLLKLNFGIMCLHIMLMSTFVALPGQLE
AAGFPAAEHWKIYLVTMVISFISVVPFIIYAEVKRKMKRVFLLCVAILLIAEIVLWGAGGYFWELVAGVQLFFLAFNLLE
ALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGALGGWVDGFFDSQTVFLLGALLAMLWLLVASTMSEPPYVSSLRVE
VPDGVVVDSALQARLLSASGVHQALVVPEERSVYIKIDSKVTNRFEIEQLIKGV
>Mature_454_residues
MNDNKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLAQAVFQIPFGLLSDRIGRKPL
IVGGLLIFVLGSVIAALTDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVLGPIVTH
QLGLHALFWMIAILATVGILLTLWVVPNSHNHVLNRESGMVKGCFSKVLAEPRLLKLNFGIMCLHIMLMSTFVALPGQLE
AAGFPAAEHWKIYLVTMVISFISVVPFIIYAEVKRKMKRVFLLCVAILLIAEIVLWGAGGYFWELVAGVQLFFLAFNLLE
ALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGALGGWVDGFFDSQTVFLLGALLAMLWLLVASTMSEPPYVSSLRVE
VPDGVVVDSALQARLLSASGVHQALVVPEERSVYIKIDSKVTNRFEIEQLIKGV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=452, Percent_Identity=82.3008849557522, Blast_Score=764, Evalue=0.0,
Organism=Escherichia coli, GI1790146, Length=153, Percent_Identity=30.0653594771242, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48862; Mature: 48862

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]