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The map label for this gene is yneB [C]

Identifier: 238893244

GI number: 238893244

Start: 1086586

End: 1087404

Strand: Reverse

Name: yneB [C]

Synonym: KP1_1114

Alternate gene names: 238893244

Gene position: 1087404-1086586 (Counterclockwise)

Preceding gene: 238893245

Following gene: 238893243

Centisome position: 20.72

GC content: 51.53

Gene sequence:

>819_bases
TTGTTTTTTTATCTCAGGAGTAAACAAATGTCTAAAGAACGTCGTCTCTCAAGAATATTCGCAAAAGACGGTAAATCCGT
GACCTTAGCGCTGGATGGCTACTATTTTTCCACGAAAACAAATGGTATTGATAATACGATAAATCAGCTCCCTGCTCTGG
TGGAACACGGCCTGGATTGCGCGCTTGTCACGTACGGCATGTTGAAGAATTATCGGGAAGCACTGAACAGCGTTCCCGTT
GTGTTACGCGTCGACAGCACGGTCAGTATCTTTGACAATACCGTTCCCGATACTACCCCCGTTTTTTCCGTCGAAGATGC
GCTTAAAGTCGCTGCCGAGGGCGTGGTCTGCATGACCTTCCCCGGCGCCTTCAATGAAGAAAAAACCCACATTATGGCGA
TGCAACTCGCACAGGCAGCGGATCGCTGGAATGTACCGCTGATTGTCGAATCGCTCCCGTATGGTTATCCCGTCACCAGC
GATGACTCTAACAATCCGGCCATCATCGCTGCATCGGCCCGCGCCGCGGTGGAGCTGGGCGCGGACGTCATCAAAACGCG
TTTTACCGGTTCACCAGAGGACCGACTGATCGTTGAAGCTGCTGGCGTGCCGGTGCTTGCCTTAGGAGGGCCAAAAACCG
GCATCGACGGTTACTTCAAATTTGTTCAGCACTGTATGCAGATGGGTGCGAAAGGCGTTGCTGTGGGAAGAAACATTACC
CAGGATCCGCAGCCGGCGAAAGTGGTAGCAGGTCTGAATGCCATCATCCATGAAAACGCAACAGCGGAAGATGCATACAG
CCTCTACATGGCTAAATAA

Upstream 100 bases:

>100_bases
TAAAAAATTGTATTGATAATGCTTTGGATCCCTGAACCATTATCAAAAGGGTATGTGAACAGAAAGCCCTCAGAGACGCG
AGTCTCTGAGGGCTTTTTTT

Downstream 100 bases:

>100_bases
CATCGGAAATTAATATGATTTCAAATAACACCATCATCCCTTCCATCAGGAAGTATAAATACTTTGAGAAAGCATTATCC
TGCCAGTCAGAATATGTGCT

Product: putative phospho-2-dehydro-3-deoxyheptonate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MFFYLRSKQMSKERRLSRIFAKDGKSVTLALDGYYFSTKTNGIDNTINQLPALVEHGLDCALVTYGMLKNYREALNSVPV
VLRVDSTVSIFDNTVPDTTPVFSVEDALKVAAEGVVCMTFPGAFNEEKTHIMAMQLAQAADRWNVPLIVESLPYGYPVTS
DDSNNPAIIAASARAAVELGADVIKTRFTGSPEDRLIVEAAGVPVLALGGPKTGIDGYFKFVQHCMQMGAKGVAVGRNIT
QDPQPAKVVAGLNAIIHENATAEDAYSLYMAK

Sequences:

>Translated_272_residues
MFFYLRSKQMSKERRLSRIFAKDGKSVTLALDGYYFSTKTNGIDNTINQLPALVEHGLDCALVTYGMLKNYREALNSVPV
VLRVDSTVSIFDNTVPDTTPVFSVEDALKVAAEGVVCMTFPGAFNEEKTHIMAMQLAQAADRWNVPLIVESLPYGYPVTS
DDSNNPAIIAASARAAVELGADVIKTRFTGSPEDRLIVEAAGVPVLALGGPKTGIDGYFKFVQHCMQMGAKGVAVGRNIT
QDPQPAKVVAGLNAIIHENATAEDAYSLYMAK
>Mature_272_residues
MFFYLRSKQMSKERRLSRIFAKDGKSVTLALDGYYFSTKTNGIDNTINQLPALVEHGLDCALVTYGMLKNYREALNSVPV
VLRVDSTVSIFDNTVPDTTPVFSVEDALKVAAEGVVCMTFPGAFNEEKTHIMAMQLAQAADRWNVPLIVESLPYGYPVTS
DDSNNPAIIAASARAAVELGADVIKTRFTGSPEDRLIVEAAGVPVLALGGPKTGIDGYFKFVQHCMQMGAKGVAVGRNIT
QDPQPAKVVAGLNAIIHENATAEDAYSLYMAK

Specific function: Unknown

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=261, Percent_Identity=29.8850574712644, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010210
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 29415; Mature: 29415

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFYLRSKQMSKERRLSRIFAKDGKSVTLALDGYYFSTKTNGIDNTINQLPALVEHGLDC
CEEEEECHHHHHHHHHHHHHHCCCCEEEEEEECEEEECCCCCCHHHHHHHHHHHHCCCCH
ALVTYGMLKNYREALNSVPVVLRVDSTVSIFDNTVPDTTPVFSVEDALKVAAEGVVCMTF
HHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEEEC
PGAFNEEKTHIMAMQLAQAADRWNVPLIVESLPYGYPVTSDDSNNPAIIAASARAAVELG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHH
ADVIKTRFTGSPEDRLIVEAAGVPVLALGGPKTGIDGYFKFVQHCMQMGAKGVAVGRNIT
HHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCC
QDPQPAKVVAGLNAIIHENATAEDAYSLYMAK
CCCCCHHHHHHHHHHHHCCCCCCCHHEEEECC
>Mature Secondary Structure
MFFYLRSKQMSKERRLSRIFAKDGKSVTLALDGYYFSTKTNGIDNTINQLPALVEHGLDC
CEEEEECHHHHHHHHHHHHHHCCCCEEEEEEECEEEECCCCCCHHHHHHHHHHHHCCCCH
ALVTYGMLKNYREALNSVPVVLRVDSTVSIFDNTVPDTTPVFSVEDALKVAAEGVVCMTF
HHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEEEC
PGAFNEEKTHIMAMQLAQAADRWNVPLIVESLPYGYPVTSDDSNNPAIIAASARAAVELG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHH
ADVIKTRFTGSPEDRLIVEAAGVPVLALGGPKTGIDGYFKFVQHCMQMGAKGVAVGRNIT
HHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCC
QDPQPAKVVAGLNAIIHENATAEDAYSLYMAK
CCCCCHHHHHHHHHHHHCCCCCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]