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The map label for this gene is glpP [H]

Identifier: 238893243

GI number: 238893243

Start: 1086020

End: 1086571

Strand: Reverse

Name: glpP [H]

Synonym: KP1_1112

Alternate gene names: 238893243

Gene position: 1086571-1086020 (Counterclockwise)

Preceding gene: 238893244

Following gene: 238893242

Centisome position: 20.7

GC content: 44.2

Gene sequence:

>552_bases
ATGATTTCAAATAACACCATCATCCCTTCCATCAGGAAGTATAAATACTTTGAGAAAGCATTATCCTGCCAGTCAGAATA
TGTGCTGCTATCCGAAGCGAATATCGGCAATCTGCAGTCGCTGATTGGCAAATGCCATCAAAGCGGTAAGAAGGTCCTCG
TTCACCTTGAATTACTGGGCGGCTTTAAACCGGATCAGGCGGGGATCAATCTGCTGAAAAATTATTACAAGGTTGATGGT
GTTATTTCTTCCAATCTCTCCGCGCTACGCTACGCCAAAAAAGAGGGATTGCTGACCGTATATCGGGTTTTACTTATCGA
TTCGCGATCGCTTGATCAGTCGCTCGATATTGTTAAACACAGTCCACCGGACGCAATTGAAATCTTACCTGCTGAATATG
CCTGCCAGTGTCTGGAGTTGATTAGCCGAAATTTGAAAGGCTTTGATGTGGTATTCATAGCCGGAGGCTTTGTTAAGCGC
AAATACCTTGTAGATAAAATATTCCATGCCGGATTTAAAGGGATAACCACCAGCGAGCCCGGCTTATGGTAA

Upstream 100 bases:

>100_bases
CGGCGAAAGTGGTAGCAGGTCTGAATGCCATCATCCATGAAAACGCAACAGCGGAAGATGCATACAGCCTCTACATGGCT
AAATAACATCGGAAATTAAT

Downstream 100 bases:

>100_bases
CCAATAAGGAGTCCACGCGAATGAAAGATGAATACGTCATGGGCATCGACAATGGTGGAACCGTCACCAAGGCAGCCATC
TATGACCGTAAAGGACAGGT

Product: transcriptional antiterminator of glycerol uptake operon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MISNNTIIPSIRKYKYFEKALSCQSEYVLLSEANIGNLQSLIGKCHQSGKKVLVHLELLGGFKPDQAGINLLKNYYKVDG
VISSNLSALRYAKKEGLLTVYRVLLIDSRSLDQSLDIVKHSPPDAIEILPAEYACQCLELISRNLKGFDVVFIAGGFVKR
KYLVDKIFHAGFKGITTSEPGLW

Sequences:

>Translated_183_residues
MISNNTIIPSIRKYKYFEKALSCQSEYVLLSEANIGNLQSLIGKCHQSGKKVLVHLELLGGFKPDQAGINLLKNYYKVDG
VISSNLSALRYAKKEGLLTVYRVLLIDSRSLDQSLDIVKHSPPDAIEILPAEYACQCLELISRNLKGFDVVFIAGGFVKR
KYLVDKIFHAGFKGITTSEPGLW
>Mature_183_residues
MISNNTIIPSIRKYKYFEKALSCQSEYVLLSEANIGNLQSLIGKCHQSGKKVLVHLELLGGFKPDQAGINLLKNYYKVDG
VISSNLSALRYAKKEGLLTVYRVLLIDSRSLDQSLDIVKHSPPDAIEILPAEYACQCLELISRNLKGFDVVFIAGGFVKR
KYLVDKIFHAGFKGITTSEPGLW

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription [H]

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=183, Percent_Identity=26.2295081967213, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 20395; Mature: 20395

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNNTIIPSIRKYKYFEKALSCQSEYVLLSEANIGNLQSLIGKCHQSGKKVLVHLELLG
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHEEEEEHHHC
GFKPDQAGINLLKNYYKVDGVISSNLSALRYAKKEGLLTVYRVLLIDSRSLDQSLDIVKH
CCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHC
SPPDAIEILPAEYACQCLELISRNLKGFDVVFIAGGFVKRKYLVDKIFHAGFKGITTSEP
CCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
GLW
CCC
>Mature Secondary Structure
MISNNTIIPSIRKYKYFEKALSCQSEYVLLSEANIGNLQSLIGKCHQSGKKVLVHLELLG
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHEEEEEHHHC
GFKPDQAGINLLKNYYKVDGVISSNLSALRYAKKEGLLTVYRVLLIDSRSLDQSLDIVKH
CCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHC
SPPDAIEILPAEYACQCLELISRNLKGFDVVFIAGGFVKRKYLVDKIFHAGFKGITTSEP
CCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
GLW
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377 [H]