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The map label for this gene is ispC [H]

Identifier: 238893169

GI number: 238893169

Start: 1005889

End: 1007091

Strand: Direct

Name: ispC [H]

Synonym: KP1_1027

Alternate gene names: 238893169

Gene position: 1005889-1007091 (Clockwise)

Preceding gene: 238893168

Following gene: 238893170

Centisome position: 19.17

GC content: 60.35

Gene sequence:

>1203_bases
ATGAAGCAATTAACCGTTCTCGGTTCGACCGGCTCCATTGGCTGTAGCACGCTGGACGTGGTGCGCCATAACCCTGGTCG
CTTTTCCGTCGCCGCGCTGGTCGCGGGGAAAAACGTTGACCGTATGGTTGAACAATGCCTGGAATTTACCCCCCGTTACG
CGGTGATGGACGATGCGCAAAGCGCTGAGCGGTTGCGCACCCGTCTGCATGAGCATGGCTGTCGCACCGAGGTGCTAAGC
GGCCAGCAGGCGGCGGCCGAGGTCGCGGCGCTGGATGAGGTCGATCAGGTCATGGCGGCAATCGTCGGCGCGGCGGGACT
GGTGCCGACGCTGGCGGCGATCCGCGCCGGGAAAACGGTATTGTTAGCGAATAAAGAATCGCTGGTGACCTGCGGTCGCT
TATTCATGGAGGCGGTGCAACAGTCGGGGGCGCGATTGCTACCGGTCGATAGCGAGCATAACGCTATTTTTCAGAGTATG
CCGGAGACAATTCAGCAGCATCTGGGATACGCTGATCTTGCCCGGAATGGCGTCTCGTCAATCCTGCTGACCGGCTCCGG
TGGGCCTTTCCGCGAGACGGCCGTGGCTGAACTGGCGGCGATGACCCCGGATCAGGCCTGCCGTCATCCCAACTGGTCGA
TGGGGCGCAAGATCTCCGTCGATTCGGCCACGATGATGAACAAAGGCCTGGAATATATTGAAGCGCGCTGGCTGTTTAAC
GCCTCGGCCCAGCAGATGGAAGTGCTGATCCATCCGCAGTCGGTGATCCACTCGATGGTTCGCTATCAGGATGGCAGCGT
GCTGGCCCAGCTTGGGGAGCCGGATATGCGCACGCCGATCGCCCATACCATGGGCTGGCCGCAGCGACTGAATTCCGGCG
TTAAACCGCTGGACTTCTGTCAGTTGAGCAATCTGAGCTTCTCCGCGCCGGACTATACGCGATATCCGTGCCTGAAGTTG
GCGATGGACGCGTTTGACGTCGGCCAGGCCGCGACCACGACGCTGAATGCGGCTAATGAAGAGTCGGTTGCCGCGTTTCT
GCATGGCGATATCCGCTTTACCGATATTGCGGCGGTTAACCTGGCGGTGCTGGATAAGATGGACCTGCAGGAGCCGCAAA
GCATTGATGATGTTCTGGTTATCGACGCCGAGGCGCGCGCAATCGCTCACCAGCAGCTGCAGCGGTTGGTTGCGCAGGCG
TAA

Upstream 100 bases:

>100_bases
TGAAGGCCTAATGCCGCCGCCTTATCCCCGATAGTTGCTGCGTAGGGGCTTGCTGGCGGCGTTTTGCTTTTTATTCTGTT
TCCACTCTTCTGGACGTCTC

Downstream 100 bases:

>100_bases
CGCGGTGATATTTGTGGGCGCAAGGCTTCGGTGATATAGTCTGCGCCACCCGATCGTTGCATTTTGTTGTTAAAGATTAC
GGTGGCCGTGACAAAACACG

Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Products: NA

Alternate protein names: DXP reductoisomerase; 1-deoxyxylulose-5-phosphate reductoisomerase; 2-C-methyl-D-erythritol 4-phosphate synthase [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKQLTVLGSTGSIGCSTLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRYAVMDDAQSAERLRTRLHEHGCRTEVLS
GQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAIRAGKTVLLANKESLVTCGRLFMEAVQQSGARLLPVDSEHNAIFQSM
PETIQQHLGYADLARNGVSSILLTGSGGPFRETAVAELAAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN
ASAQQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMGWPQRLNSGVKPLDFCQLSNLSFSAPDYTRYPCLKL
AMDAFDVGQAATTTLNAANEESVAAFLHGDIRFTDIAAVNLAVLDKMDLQEPQSIDDVLVIDAEARAIAHQQLQRLVAQA

Sequences:

>Translated_400_residues
MKQLTVLGSTGSIGCSTLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRYAVMDDAQSAERLRTRLHEHGCRTEVLS
GQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAIRAGKTVLLANKESLVTCGRLFMEAVQQSGARLLPVDSEHNAIFQSM
PETIQQHLGYADLARNGVSSILLTGSGGPFRETAVAELAAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN
ASAQQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMGWPQRLNSGVKPLDFCQLSNLSFSAPDYTRYPCLKL
AMDAFDVGQAATTTLNAANEESVAAFLHGDIRFTDIAAVNLAVLDKMDLQEPQSIDDVLVIDAEARAIAHQQLQRLVAQA
>Mature_400_residues
MKQLTVLGSTGSIGCSTLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRYAVMDDAQSAERLRTRLHEHGCRTEVLS
GQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAIRAGKTVLLANKESLVTCGRLFMEAVQQSGARLLPVDSEHNAIFQSM
PETIQQHLGYADLARNGVSSILLTGSGGPFRETAVAELAAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN
ASAQQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMGWPQRLNSGVKPLDFCQLSNLSFSAPDYTRYPCLKL
AMDAFDVGQAATTTLNAANEESVAAFLHGDIRFTDIAAVNLAVLDKMDLQEPQSIDDVLVIDAEARAIAHQQLQRLVAQA

Specific function: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) [H]

COG id: COG0743

COG function: function code I; 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DXR family [H]

Homologues:

Organism=Escherichia coli, GI1786369, Length=398, Percent_Identity=80.4020100502513, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003821
- InterPro:   IPR013644
- InterPro:   IPR013512
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08436 DXP_redisom_C; PF02670 DXP_reductoisom [H]

EC number: =1.1.1.267 [H]

Molecular weight: Translated: 43280; Mature: 43280

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLTVLGSTGSIGCSTLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRYAVMDDAQ
CCCEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEECCCHH
SAERLRTRLHEHGCRTEVLSGQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAIRAGKTV
HHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LLANKESLVTCGRLFMEAVQQSGARLLPVDSEHNAIFQSMPETIQQHLGYADLARNGVSS
EEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCE
ILLTGSGGPFRETAVAELAAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN
EEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCC
ASAQQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMGWPQRLNSGVKPLDFC
CCHHHHEEEECCHHHHHHHHHCCCCCHHEECCCCCCCCCHHHHCCCHHHHCCCCCCHHHH
QLSNLSFSAPDYTRYPCLKLAMDAFDVGQAATTTLNAANEESVAAFLHGDIRFTDIAAVN
EECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEECCCCCHHEEHEEECCEEEEHHHHHH
LAVLDKMDLQEPQSIDDVLVIDAEARAIAHQQLQRLVAQA
HHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQLTVLGSTGSIGCSTLDVVRHNPGRFSVAALVAGKNVDRMVEQCLEFTPRYAVMDDAQ
CCCEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEECCCHH
SAERLRTRLHEHGCRTEVLSGQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAIRAGKTV
HHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LLANKESLVTCGRLFMEAVQQSGARLLPVDSEHNAIFQSMPETIQQHLGYADLARNGVSS
EEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCE
ILLTGSGGPFRETAVAELAAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN
EEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCC
ASAQQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMGWPQRLNSGVKPLDFC
CCHHHHEEEECCHHHHHHHHHCCCCCHHEECCCCCCCCCHHHHCCCHHHHCCCCCCHHHH
QLSNLSFSAPDYTRYPCLKLAMDAFDVGQAATTTLNAANEESVAAFLHGDIRFTDIAAVN
EECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEECCCCCHHEEHEEECCEEEEHHHHHH
LAVLDKMDLQEPQSIDDVLVIDAEARAIAHQQLQRLVAQA
HHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]