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The map label for this gene is yjaH [H]

Identifier: 238892476

GI number: 238892476

Start: 249887

End: 250588

Strand: Direct

Name: yjaH [H]

Synonym: KP1_0242

Alternate gene names: 238892476

Gene position: 249887-250588 (Clockwise)

Preceding gene: 238892475

Following gene: 238892479

Centisome position: 4.76

GC content: 61.97

Gene sequence:

>702_bases
GTGGCAGTGAACAGTTTTATCGAAGGGGCTATTAAGCCCCTTTTGTCTGTCTGGCGCCGGCCTCTGGCGCTGGCGGGCAT
CCTGTTGCTGACTGCCTGCAGCCACGACACGTCGCTACCGCCGTTTACCGCCAGCGGATATGCGGACAATCAGGGAGCGA
TGCGCATCTGGCGTAAAGATTCTGGCGATGAAGTCCATCTTCTCGCCGCCTTCAGCCCGTGGCGTCACGGGGACACTTCG
ACCAGCGAATATCGCTGGCAGGGCGATCAACTGGCGCTTATCGAACTCAATGTCTATGGCAAACCGCCGGAACATATTCG
CGCCCGTTTCGACGCGCAGGGCGATCTGAGCTTTATGCAACGGGAAGTGGACGGGCAGAAGCAGCAGCTCTCCAGCGACC
AGGTCGCGCTATATCGTTATCGCGCCGAACAGATCCGCCAGACCAGCGACGCCCTCCGCCAGGGGCGGGTCGTCCTGCGG
CAGGGGCGCTGGAACGCTGCCGCGCATACCGTGCTGACCTGCGAAGGGCAGACGGTTACGCCCGACCTCGATAGCCGGGC
CCTGGCGCACATTGAACGCCGCCAGAGCCACGCTTCCGCCGCAGTGAGCATTGCCTGGCTGGAGGCGCCGGAAGGCTCTC
AACTGCTGCTGGTCGCCAATGAAAACTTCTGCACCTGGCAGCCGACGGAAAAAAGCTTCTAA

Upstream 100 bases:

>100_bases
CCGCAACCCGCAGACCGGTAAAGAGATCAAAATCGCTGCAGCTAACGTGCCGGCATTTGTTTCTGGCAAAGCACTGAAAG
ACGCAGTTAAGTAAGACCGC

Downstream 100 bases:

>100_bases
CCTTTACCAGTGGTTCATGCCCATATGACCGCCGGCGCTACCGCGACAGCCGCCATATCCCATTCCTGCGCCGCGGGGAA
CGCCTGCCTCAGCCAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAVNSFIEGAIKPLLSVWRRPLALAGILLLTACSHDTSLPPFTASGYADNQGAMRIWRKDSGDEVHLLAAFSPWRHGDTS
TSEYRWQGDQLALIELNVYGKPPEHIRARFDAQGDLSFMQREVDGQKQQLSSDQVALYRYRAEQIRQTSDALRQGRVVLR
QGRWNAAAHTVLTCEGQTVTPDLDSRALAHIERRQSHASAAVSIAWLEAPEGSQLLLVANENFCTWQPTEKSF

Sequences:

>Translated_233_residues
MAVNSFIEGAIKPLLSVWRRPLALAGILLLTACSHDTSLPPFTASGYADNQGAMRIWRKDSGDEVHLLAAFSPWRHGDTS
TSEYRWQGDQLALIELNVYGKPPEHIRARFDAQGDLSFMQREVDGQKQQLSSDQVALYRYRAEQIRQTSDALRQGRVVLR
QGRWNAAAHTVLTCEGQTVTPDLDSRALAHIERRQSHASAAVSIAWLEAPEGSQLLLVANENFCTWQPTEKSF
>Mature_232_residues
AVNSFIEGAIKPLLSVWRRPLALAGILLLTACSHDTSLPPFTASGYADNQGAMRIWRKDSGDEVHLLAAFSPWRHGDTST
SEYRWQGDQLALIELNVYGKPPEHIRARFDAQGDLSFMQREVDGQKQQLSSDQVALYRYRAEQIRQTSDALRQGRVVLRQ
GRWNAAAHTVLTCEGQTVTPDLDSRALAHIERRQSHASAAVSIAWLEAPEGSQLLLVANENFCTWQPTEKSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=231, Percent_Identity=76.1904761904762, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 26071; Mature: 25939

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNSFIEGAIKPLLSVWRRPLALAGILLLTACSHDTSLPPFTASGYADNQGAMRIWRKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECC
SGDEVHLLAAFSPWRHGDTSTSEYRWQGDQLALIELNVYGKPPEHIRARFDAQGDLSFMQ
CCCEEEEEEEECCCCCCCCCCCCEEECCCEEEEEEEEECCCCHHHHHEECCCCCCHHHHH
REVDGQKQQLSSDQVALYRYRAEQIRQTSDALRQGRVVLRQGRWNAAAHTVLTCEGQTVT
HHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECCCEEC
PDLDSRALAHIERRQSHASAAVSIAWLEAPEGSQLLLVANENFCTWQPTEKSF
CCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEECCCEEEECCCCCCC
>Mature Secondary Structure 
AVNSFIEGAIKPLLSVWRRPLALAGILLLTACSHDTSLPPFTASGYADNQGAMRIWRKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECC
SGDEVHLLAAFSPWRHGDTSTSEYRWQGDQLALIELNVYGKPPEHIRARFDAQGDLSFMQ
CCCEEEEEEEECCCCCCCCCCCCEEECCCEEEEEEEEECCCCHHHHHEECCCCCCHHHHH
REVDGQKQQLSSDQVALYRYRAEQIRQTSDALRQGRVVLRQGRWNAAAHTVLTCEGQTVT
HHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECCCEEC
PDLDSRALAHIERRQSHASAAVSIAWLEAPEGSQLLLVANENFCTWQPTEKSF
CCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]