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The map label for this gene is yigN [H]

Identifier: 238892430

GI number: 238892430

Start: 194230

End: 195678

Strand: Direct

Name: yigN [H]

Synonym: KP1_0190

Alternate gene names: 238892430

Gene position: 194230-195678 (Clockwise)

Preceding gene: 238892429

Following gene: 238892431

Centisome position: 3.7

GC content: 59.42

Gene sequence:

>1449_bases
GTGGATCTCTCCATTATTATCAGCGCGGTTATCGCACTGGCAGCCGGGTTAATGGTTGGCTGGCTGGCGACCAAAGCGCG
CGCCGATCAAATTCGGGCCGATCTCATCGAGGAACGGCGAGAGTTGGATATTGAGCTGAGCGCCGCCCGCCAGCAACTGG
CGCAGGAGGCCCACTGGCGTGAGGAGTGTGAGCTGCTGAACAACGAGCTGCGCAGCCTGCGGGATATCAATACCTCGCTC
GAGGCCGATCTCCGTGAGGTCACCACCCGGCTCGAATCCACTCAGCTGCATGCGGAAGATAAGATCCGCCAGATGATGAA
CAGCGAGCAGCGCCTTAGCGAGCAGTTTGAAAACCTCGCCAACCGTATTTTCGAACACAGCAACCGGCGGGTCGATGAGC
AAAACCGCCAGAGCCTGCATGGCCTGCTGACGCCGCTACGCGAACAGCTGGACGGGTTCCGCCGCCAGGTGCAGGAGAGC
TTTGGCCAGGAGGCGCGTGAAAGACATACCCTGGCGCATGAGATCCGCAATCTGCAGCAGTTGAACGCGCAGATGGCACA
GGAGGCGCTGAACCTGACCAAAGCGCTGAAGGGGGATAACAAAACTCAGGGCAACTGGGGGGAAGTGGTCTTAACCCGCG
TGCTGGAGGCCTCCGGCCTGCGCGAAGGCTATGAGTACCAGACTCAGGTCAGTATTGAGACCGACAACCGCTCGCGGATG
CAGCCGGACGTTATCGTGCGCCTGCCGCAGGGTAAGGACGTGGTGATCGACGCCAAAATGACCCTGGTCGCCTATGAGCG
CTATTTCAACGCCGAAGACGACTACACCCGCGAAGTCGCGCTGCAGGAACACCTTGCCTCGGTGCGAAACCATATTCGCC
TGCTGGGACGCAAGGATTATCAACAGCTGCCTGGCCTGCGCTCGCTCGACTATGTGCTGATGTTTATTCCCGTTGAGCCG
GCGTTCCTGCTGGCCATCGATCGCCAGCCTGAGCTCATCAGCGAGGCGCTGCAAAATAATATTATGCTGGTTAGCCCGAC
GACGCTGCTGGTAGCCCTGCGCACTATCGCCAATCTGTGGCGCTATGAGCACCAGAGTCGTAACGCGCAAAAGATTGCCG
AGCGGGCGGGGCGCCTTTACGACAAAATGCGCCTGTTTGTGGATGATATGTCCGCCATCGGCCAGAGCCTGGATAAGGCG
CAAGAGAGCTATCGCCAGGCGATGAAAAAGCTCGCTTCCGGGCGTGGTAATCTGCTGGCCCAGGCGGAGGCCTTTCGCGG
CCTGGGCGTGGAGGTCAAGCGCGGGATTAATCCTGATTTAGTCGAACAAGCTACGGCTCAGGACGAGCAATATCGTCTCG
AAGATGAGGATAACCTGCCGGAAAATGACGCATTTTCACCCGACTCTGCCGAGACGGTGCGTAGCCGGGAGGCGGCTCCG
CCATGCTGA

Upstream 100 bases:

>100_bases
CTTTCTTTTTTGCGTCGCCTCTCGCAGGAAATTCCTTTTAAACTGGACGTTTGTACAGCACAATTCTATTTTGTGTCATC
AGGTTATCGCAGGGGGCGTC

Downstream 100 bases:

>100_bases
AACGTATGGGAAATGCGCTGAGTCTGATACACTCAGTGAACATTTTCTTGAAAAGCAAGCAGGCATAGAGATGGTTGAGG
ATTCACAAGAAACGACGCAC

Product: DNA recombination protein RmuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MDLSIIISAVIALAAGLMVGWLATKARADQIRADLIEERRELDIELSAARQQLAQEAHWREECELLNNELRSLRDINTSL
EADLREVTTRLESTQLHAEDKIRQMMNSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLHGLLTPLREQLDGFRRQVQES
FGQEARERHTLAHEIRNLQQLNAQMAQEALNLTKALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDNRSRM
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREVALQEHLASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEP
AFLLAIDRQPELISEALQNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQKIAERAGRLYDKMRLFVDDMSAIGQSLDKA
QESYRQAMKKLASGRGNLLAQAEAFRGLGVEVKRGINPDLVEQATAQDEQYRLEDEDNLPENDAFSPDSAETVRSREAAP
PC

Sequences:

>Translated_482_residues
MDLSIIISAVIALAAGLMVGWLATKARADQIRADLIEERRELDIELSAARQQLAQEAHWREECELLNNELRSLRDINTSL
EADLREVTTRLESTQLHAEDKIRQMMNSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLHGLLTPLREQLDGFRRQVQES
FGQEARERHTLAHEIRNLQQLNAQMAQEALNLTKALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDNRSRM
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREVALQEHLASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEP
AFLLAIDRQPELISEALQNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQKIAERAGRLYDKMRLFVDDMSAIGQSLDKA
QESYRQAMKKLASGRGNLLAQAEAFRGLGVEVKRGINPDLVEQATAQDEQYRLEDEDNLPENDAFSPDSAETVRSREAAP
PC
>Mature_482_residues
MDLSIIISAVIALAAGLMVGWLATKARADQIRADLIEERRELDIELSAARQQLAQEAHWREECELLNNELRSLRDINTSL
EADLREVTTRLESTQLHAEDKIRQMMNSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLHGLLTPLREQLDGFRRQVQES
FGQEARERHTLAHEIRNLQQLNAQMAQEALNLTKALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDNRSRM
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREVALQEHLASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEP
AFLLAIDRQPELISEALQNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQKIAERAGRLYDKMRLFVDDMSAIGQSLDKA
QESYRQAMKKLASGRGNLLAQAEAFRGLGVEVKRGINPDLVEQATAQDEQYRLEDEDNLPENDAFSPDSAETVRSREAAP
PC

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=476, Percent_Identity=80.672268907563, Blast_Score=791, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 55179; Mature: 55179

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSIIISAVIALAAGLMVGWLATKARADQIRADLIEERRELDIELSAARQQLAQEAHWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EECELLNNELRSLRDINTSLEADLREVTTRLESTQLHAEDKIRQMMNSEQRLSEQFENLA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
NRIFEHSNRRVDEQNRQSLHGLLTPLREQLDGFRRQVQESFGQEARERHTLAHEIRNLQQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNAQMAQEALNLTKALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDNRSRM
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREVALQEHLASVRNHIRLLGRKDY
CCCCEEECCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
QQLPGLRSLDYVLMFIPVEPAFLLAIDRQPELISEALQNNIMLVSPTTLLVALRTIANLW
HHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
RYEHQSRNAQKIAERAGRLYDKMRLFVDDMSAIGQSLDKAQESYRQAMKKLASGRGNLLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QAEAFRGLGVEVKRGINPDLVEQATAQDEQYRLEDEDNLPENDAFSPDSAETVRSREAAP
HHHHHHCCCCHHHCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PC
CC
>Mature Secondary Structure
MDLSIIISAVIALAAGLMVGWLATKARADQIRADLIEERRELDIELSAARQQLAQEAHWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EECELLNNELRSLRDINTSLEADLREVTTRLESTQLHAEDKIRQMMNSEQRLSEQFENLA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
NRIFEHSNRRVDEQNRQSLHGLLTPLREQLDGFRRQVQESFGQEARERHTLAHEIRNLQQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNAQMAQEALNLTKALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDNRSRM
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREVALQEHLASVRNHIRLLGRKDY
CCCCEEECCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
QQLPGLRSLDYVLMFIPVEPAFLLAIDRQPELISEALQNNIMLVSPTTLLVALRTIANLW
HHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
RYEHQSRNAQKIAERAGRLYDKMRLFVDDMSAIGQSLDKAQESYRQAMKKLASGRGNLLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QAEAFRGLGVEVKRGINPDLVEQATAQDEQYRLEDEDNLPENDAFSPDSAETVRSREAAP
HHHHHHCCCCHHHCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]