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The map label for this gene is gldA [H]

Identifier: 238892349

GI number: 238892349

Start: 100940

End: 102043

Strand: Reverse

Name: gldA [H]

Synonym: KP1_0104

Alternate gene names: 238892349

Gene position: 102043-100940 (Counterclockwise)

Preceding gene: 238892350

Following gene: 238892345

Centisome position: 1.94

GC content: 62.5

Gene sequence:

>1104_bases
ATGGATCGCATTATTCAATCACCAGGCAAATATATCCAGGGCGCAGGCGCCATCAAGCGCCTCGGCGACTATCTGAAACC
GCTGGCCGAGCGCTGGCTGGTGGTCGGTGATAAGTTCGTCCTGGGGTTTGCGGAAGAGATGCTGCGTAAAAGCCTGGCCG
ACGCTGGCCTGGCGGCCGAAATCGCGCCGTTTGGCGGTGAGTGTTCGCATAATGAAATCAACCGCCTACGCGATATCGCC
GGCAACGCGAAGTGCACCGCCGTGCTGGGGATCGGCGGTGGCAAAACCCTGGATACCGCGAAAGCGCTGGCCCACTTTAT
GAATGTGCCGGTGGCGATCGCCCCCACCATCGCCTCCACCGATGCGCCGTGCAGCGCGCTGTCGGTGATATACACCGACG
AAGGGGAATTCGACAGCTACCTGATGCTGCCGCGCAACCCCAACATGGTCATTGTCGATACGCAGATCGTTGCCGGCGCG
CCGGCCCGCCTGCTGGCCGCCGGGATTGGCGATGCGCTGGCTACCTGGTTCGAAGCCCGCGCCTGCTCCCGTAGCGGCGC
CACCACCATGGCGGGCGGGAAGTGCACCCAGGCGGCGCTGGCGCTGGGCGAGCTATGCTACAACACCTTACTCGAAGAGG
GTGAAAAAGCGATGCTGGCCGCCGAACAGCACGTGGTCACCCCGGCGCTGGAGCGGGTGGTGGAAGCCAACACCTATCTG
AGCGGCGTGGGTTTCGAAAGCGGTGGTCTCGCGGCGGCGCACGCGATTCATAACGGCATGACGGCCATCCCTGACGCCCA
TCACTATTATCACGGGGAAAAAGTGGCGTTCGGAACCCTGACGCAGCTGGTGCTGGAAAATGCGCCGGTGGACGAAATAG
AGACCGTCGCCGCGCTGTGCCACAGCGTTGGGCTGCCGATCACCCTGGCGCAGCTGGATATCAAAGGTGATATCCCGACC
AAAATGCGTCTGGTGGCGGAAGCCGCCTGCGCTGAAGGCGAAACCATTCACAATATGCCGGGCGGCGTTGATTCCGACCA
GGTCTACGCCGCGCTGCTGGTGGCCGACCAGTATGGTCAGCGCTTCCTGCAGGAATGGGAATAA

Upstream 100 bases:

>100_bases
GTTTGAACAAGACTGGAATAACGCCTTTGGCACGCTGAATCTGTAACCGGATCCGCGAGCCGCCTGCGGGCGGCGTCACG
GTCATCGAGGAGGAATCGAA

Downstream 100 bases:

>100_bases
ACCAGAGCAAAACACCCGGCGTCAGCCGGGTGTTTTTTATGCATCTCTGCAGGCCGGAGCAGGCTATGCCCCTCGTCTCT
TGATACTGATCATCGCCAAC

Product: glycerol dehydrogenase

Products: NA

Alternate protein names: GDH; GLDH [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MDRIIQSPGKYIQGAGAIKRLGDYLKPLAERWLVVGDKFVLGFAEEMLRKSLADAGLAAEIAPFGGECSHNEINRLRDIA
GNAKCTAVLGIGGGKTLDTAKALAHFMNVPVAIAPTIASTDAPCSALSVIYTDEGEFDSYLMLPRNPNMVIVDTQIVAGA
PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALGELCYNTLLEEGEKAMLAAEQHVVTPALERVVEANTYL
SGVGFESGGLAAAHAIHNGMTAIPDAHHYYHGEKVAFGTLTQLVLENAPVDEIETVAALCHSVGLPITLAQLDIKGDIPT
KMRLVAEAACAEGETIHNMPGGVDSDQVYAALLVADQYGQRFLQEWE

Sequences:

>Translated_367_residues
MDRIIQSPGKYIQGAGAIKRLGDYLKPLAERWLVVGDKFVLGFAEEMLRKSLADAGLAAEIAPFGGECSHNEINRLRDIA
GNAKCTAVLGIGGGKTLDTAKALAHFMNVPVAIAPTIASTDAPCSALSVIYTDEGEFDSYLMLPRNPNMVIVDTQIVAGA
PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALGELCYNTLLEEGEKAMLAAEQHVVTPALERVVEANTYL
SGVGFESGGLAAAHAIHNGMTAIPDAHHYYHGEKVAFGTLTQLVLENAPVDEIETVAALCHSVGLPITLAQLDIKGDIPT
KMRLVAEAACAEGETIHNMPGGVDSDQVYAALLVADQYGQRFLQEWE
>Mature_367_residues
MDRIIQSPGKYIQGAGAIKRLGDYLKPLAERWLVVGDKFVLGFAEEMLRKSLADAGLAAEIAPFGGECSHNEINRLRDIA
GNAKCTAVLGIGGGKTLDTAKALAHFMNVPVAIAPTIASTDAPCSALSVIYTDEGEFDSYLMLPRNPNMVIVDTQIVAGA
PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALGELCYNTLLEEGEKAMLAAEQHVVTPALERVVEANTYL
SGVGFESGGLAAAHAIHNGMTAIPDAHHYYHGEKVAFGTLTQLVLENAPVDEIETVAALCHSVGLPITLAQLDIKGDIPT
KMRLVAEAACAEGETIHNMPGGVDSDQVYAALLVADQYGQRFLQEWE

Specific function: Catalyzes the NAD-dependent oxidation of glycerol to dihydroxyacetone (glycerone). Allows microorganisms to utilize glycerol as a source of carbon under anaerobic conditions [H]

COG id: COG0371

COG function: function code C; Glycerol dehydrogenase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI87082352, Length=367, Percent_Identity=89.1008174386921, Blast_Score=674, Evalue=0.0,
Organism=Escherichia coli, GI1786815, Length=355, Percent_Identity=30.1408450704225, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211
- InterPro:   IPR016205 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.1.1.6 [H]

Molecular weight: Translated: 38705; Mature: 38705

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2 ; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIIQSPGKYIQGAGAIKRLGDYLKPLAERWLVVGDKFVLGFAEEMLRKSLADAGLAAE
CCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEE
IAPFGGECSHNEINRLRDIAGNAKCTAVLGIGGGKTLDTAKALAHFMNVPVAIAPTIAST
ECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCC
DAPCSALSVIYTDEGEFDSYLMLPRNPNMVIVDTQIVAGAPARLLAAGIGDALATWFEAR
CCCCCEEEEEEECCCCCCCEEEECCCCCEEEEECCEECCCCHHHHHHHHHHHHHHHHHHH
ACSRSGATTMAGGKCTQAALALGELCYNTLLEEGEKAMLAAEQHVVTPALERVVEANTYL
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGVGFESGGLAAAHAIHNGMTAIPDAHHYYHGEKVAFGTLTQLVLENAPVDEIETVAALC
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHH
HSVGLPITLAQLDIKGDIPTKMRLVAEAACAEGETIHNMPGGVDSDQVYAALLVADQYGQ
HHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
RFLQEWE
HHHHHCC
>Mature Secondary Structure
MDRIIQSPGKYIQGAGAIKRLGDYLKPLAERWLVVGDKFVLGFAEEMLRKSLADAGLAAE
CCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEE
IAPFGGECSHNEINRLRDIAGNAKCTAVLGIGGGKTLDTAKALAHFMNVPVAIAPTIAST
ECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCC
DAPCSALSVIYTDEGEFDSYLMLPRNPNMVIVDTQIVAGAPARLLAAGIGDALATWFEAR
CCCCCEEEEEEECCCCCCCEEEECCCCCEEEEECCEECCCCHHHHHHHHHHHHHHHHHHH
ACSRSGATTMAGGKCTQAALALGELCYNTLLEEGEKAMLAAEQHVVTPALERVVEANTYL
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGVGFESGGLAAAHAIHNGMTAIPDAHHYYHGEKVAFGTLTQLVLENAPVDEIETVAALC
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHH
HSVGLPITLAQLDIKGDIPTKMRLVAEAACAEGETIHNMPGGVDSDQVYAALLVADQYGQ
HHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
RFLQEWE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]