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The map label for this gene is pcaC [H]

Identifier: 238892345

GI number: 238892345

Start: 97363

End: 97734

Strand: Reverse

Name: pcaC [H]

Synonym: KP1_0100

Alternate gene names: 238892345

Gene position: 97734-97363 (Counterclockwise)

Preceding gene: 238892349

Following gene: 238892343

Centisome position: 1.86

GC content: 59.95

Gene sequence:

>372_bases
ATGTCCAGCGAACGTTATATCATCGGTCAGGAAATGCTTCAGCGGGTGGATGGTAAGGGCGGGGAAGCCGTCGTCGACAG
CCTGCGGGATATCGCCCCCGATTTCGCCCGCTATCTGATTGAGTTCCCCTTCGGCGATATTTACGCCAGGCCAGGGCTCG
ATTTACGCAGCCGGGAAATCGCCACCATCGCCGCGCTCACGGCGTTGGGTAACGCCGAGCCACAGCTGAAAGTACACATT
GCCGCGGGATTAAACGTCGGCCTGACGCAAGAGGAGATTACGGAAGCGATCATGCAGATGGCAGTCTATGCCGGATTCCC
GGCGGCCCTCAACGGCCTGTTTGCCGCCAGGGCGGTATTTGCGGCCCACTGA

Upstream 100 bases:

>100_bases
AGTTGTCATACTGAAAAGGTATCACGAAAAGGGTATTACTCAAGTCCGGCACACTTCCCTACCCTTCCTCTTAACGCACC
ATCACAGAGAGGAAAAAACG

Downstream 100 bases:

>100_bases
TCGCTTAAGGCCGGGCTGACTGCCCGGCCTTAAAAACTTATTTCTTCACATCGACAACGCGCTGCCCGCTAAGCTGCTCA
TCCGTTATCTTTTGCCCGGC

Product: putative gamma-carboxymuconolactone decarboxylase subunit

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSSERYIIGQEMLQRVDGKGGEAVVDSLRDIAPDFARYLIEFPFGDIYARPGLDLRSREIATIAALTALGNAEPQLKVHI
AAGLNVGLTQEEITEAIMQMAVYAGFPAALNGLFAARAVFAAH

Sequences:

>Translated_123_residues
MSSERYIIGQEMLQRVDGKGGEAVVDSLRDIAPDFARYLIEFPFGDIYARPGLDLRSREIATIAALTALGNAEPQLKVHI
AAGLNVGLTQEEITEAIMQMAVYAGFPAALNGLFAARAVFAAH
>Mature_122_residues
SSERYIIGQEMLQRVDGKGGEAVVDSLRDIAPDFARYLIEFPFGDIYARPGLDLRSREIATIAALTALGNAEPQLKVHIA
AGLNVGLTQEEITEAIMQMAVYAGFPAALNGLFAARAVFAAH

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13236; Mature: 13105

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSERYIIGQEMLQRVDGKGGEAVVDSLRDIAPDFARYLIEFPFGDIYARPGLDLRSREI
CCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHH
ATIAALTALGNAEPQLKVHIAAGLNVGLTQEEITEAIMQMAVYAGFPAALNGLFAARAVF
HHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AAH
HCC
>Mature Secondary Structure 
SSERYIIGQEMLQRVDGKGGEAVVDSLRDIAPDFARYLIEFPFGDIYARPGLDLRSREI
CCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHH
ATIAALTALGNAEPQLKVHIAAGLNVGLTQEEITEAIMQMAVYAGFPAALNGLFAARAVF
HHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AAH
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]