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The map label for this gene is yihI [H]

Identifier: 238892279

GI number: 238892279

Start: 30010

End: 30516

Strand: Direct

Name: yihI [H]

Synonym: KP1_0026

Alternate gene names: 238892279

Gene position: 30010-30516 (Clockwise)

Preceding gene: 238892277

Following gene: 238892280

Centisome position: 0.57

GC content: 56.8

Gene sequence:

>507_bases
ATGAAAAAACCGACATCCGCCACCCGTGGCAAATCCGGCCGCAAGTCGCGTGAAGAGTTAAATCAGGAAGCTCGCGATCG
CAAACGGCAGAAGAAACATCGTGGCCACGCGGCAGGCAGTCGCGCGAACGGCGGCGATGCGGCTTCAGCGGGTAAAAAAC
AGCGTCAGGCGCAAGATCCGCGCGTGGGTAGCAAAAAACCGATCCCGCTGGGCGTGAGCGAAAGCAGCGTTCCAGCTCCC
AAGCAGCATAAACCAAAGAGCGAGAAACCTATGCTTTCACCGCAGGCTGAGCTGGAGTTGCTGGAGAATGATGAGCGCCT
GGACGCGCTGCTGGAACGTCTGGAAGAGGGCGGCACCCTGAATGCTGAAGAGCAGAGCTGGGTGGACGCCAAACTGGATC
GCATTGATGAGCTGATGCAGCAGCTCGGCCTCTCTTACGATGATGAAGATGAAGAAGAGGAAGAGCGTCAGGAAGATATG
ATGCGTCTGCTGAAGGGTGGAAACTAA

Upstream 100 bases:

>100_bases
AAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGCTAGATTCCGCCTCAATTCTATACTGAATACTA
CTGTCTGAAGATTACACATC

Downstream 100 bases:

>100_bases
CATTTGCATCCCATCGGATTCCCGGTACTCCTTATAACCCTTCTGGTTATATGTTATCTGCTGTGGTTATTCGTTAAACT
ACGACGGTTGTCGCGGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKKPTSATRGKSGRKSREELNQEARDRKRQKKHRGHAAGSRANGGDAASAGKKQRQAQDPRVGSKKPIPLGVSESSVPAP
KQHKPKSEKPMLSPQAELELLENDERLDALLERLEEGGTLNAEEQSWVDAKLDRIDELMQQLGLSYDDEDEEEEERQEDM
MRLLKGGN

Sequences:

>Translated_168_residues
MKKPTSATRGKSGRKSREELNQEARDRKRQKKHRGHAAGSRANGGDAASAGKKQRQAQDPRVGSKKPIPLGVSESSVPAP
KQHKPKSEKPMLSPQAELELLENDERLDALLERLEEGGTLNAEEQSWVDAKLDRIDELMQQLGLSYDDEDEEEEERQEDM
MRLLKGGN
>Mature_168_residues
MKKPTSATRGKSGRKSREELNQEARDRKRQKKHRGHAAGSRANGGDAASAGKKQRQAQDPRVGSKKPIPLGVSESSVPAP
KQHKPKSEKPMLSPQAELELLENDERLDALLERLEEGGTLNAEEQSWVDAKLDRIDELMQQLGLSYDDEDEEEEERQEDM
MRLLKGGN

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=171, Percent_Identity=73.0994152046784, Blast_Score=187, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 18808; Mature: 18808

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPTSATRGKSGRKSREELNQEARDRKRQKKHRGHAAGSRANGGDAASAGKKQRQAQDP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
RVGSKKPIPLGVSESSVPAPKQHKPKSEKPMLSPQAELELLENDERLDALLERLEEGGTL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCC
NAEEQSWVDAKLDRIDELMQQLGLSYDDEDEEEEERQEDMMRLLKGGN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKPTSATRGKSGRKSREELNQEARDRKRQKKHRGHAAGSRANGGDAASAGKKQRQAQDP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
RVGSKKPIPLGVSESSVPAPKQHKPKSEKPMLSPQAELELLENDERLDALLERLEEGGTL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCC
NAEEQSWVDAKLDRIDELMQQLGLSYDDEDEEEEERQEDMMRLLKGGN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA