| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ada [H]
Identifier: 339905984
GI number: 339905984
Start: 3888290
End: 3889378
Strand: Reverse
Name: ada [H]
Synonym: NA
Alternate gene names: 339905984
Gene position: 3889378-3888290 (Counterclockwise)
Preceding gene: 238028957
Following gene: 238028954
Centisome position: 99.56
GC content: 72.64
Gene sequence:
>1089_bases ATGCAATCTCCCAGGTACTCGACCGATGCCGCGCGCTGGGCCGCCCTCGTCGCACGCGATGCCGAGGCCGACGGCGCGTT TTTCTACGCGGTGAAGACCACCGGCGTGTTCTGCCGGCCGAGTTGCGCATCGCGCATGCCGCGCCGCGAGAACGTGGCGT TCTTCGAGACGCCGGCTGCGGCGCGCGAGGCGGGGTTCCGGCCCTGCAAGCGCTGCCAGCCCGAGCGTGAACCGCGCGAG ATCGAAATCGTGCGGCGTGCCTGCGCGGTGCTAGACGCGAGCGACCGCGCGACGCTGGCCGAGCTCAGCGCGGCCGTTCA CGTGAGCCCGTTTCATCTGCAGCGGCTGTTCAAGCGCGTGGTCGGCGTGACGCCGCGCCAATACCAGGCGGCGCGGCGCG GCGCCGCCTTGCGCGACGCGCTGCAAGGCGGCGCCGCCGTCACGCGCGCGGCGGTCGATGCCGGCTATCAGTCGGCCTCG CGCGTCTACGAGGCGGTGCCGCGCGAGCTCGGCATGGCGCCGTCCGATTTTCGTCGCAAGGGCGCGGGGCTGCGCATCGC ATACGCCACTGCGCCGACGCCGCTCGGCTACGTGCTGGTCGGCGCGACCGAGCGCGGTATCTGCCAGATTGCGTTTGGCG ACGCGATCGCGCCGCTCGTCGACGCGCTCGCGGCGGCGTTCGAGAATGCCGAATGCGTGGCAGCGCCAGAGCGGCTCGCG CCGTTCCTTGCGCAGATCGACGCCTATCTGCGCGGCGCGAGCGAGCAGGTGGCGCTGCCGCTCGACATCAGCGCGACGGC GTTCCAGCAGCGCGTATGGGAAGCACTGCAGAAGATCCCCTATGGCCAGACGCGCAGCTACGCGCAGATCGCCGAGGCGG TGGGCTCGCCGCGCGCCGTGCGTGCCGTGGCCAATGCCTGCGCGTCCAACCCCGTCGCGCTGGCGATTCCGTGCCATCGC GTCGTGCAAAAGAGCGGCGCGCTCGCCGGCTATCGCTGGGGTGCCGCGCGCAAGGCGGCGCTGCTCGCGGCCGAGGCGCG CCATGCGGCCGGCTCGCCGGCCGAGCCGTCGCTCGACGACGCGGCATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: O6-methylguanine-DNA methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
NA
Sequences:
>Translated_362_residues MQSPRYSTDAARWAALVARDAEADGAFFYAVKTTGVFCRPSCASRMPRRENVAFFETPAAAREAGFRPCKRCQPEREPRE IEIVRRACAVLDASDRATLAELSAAVHVSPFHLQRLFKRVVGVTPRQYQAARRGAALRDALQGGAAVTRAAVDAGYQSAS RVYEAVPRELGMAPSDFRRKGAGLRIAYATAPTPLGYVLVGATERGICQIAFGDAIAPLVDALAAAFENAECVAAPERLA PFLAQIDAYLRGASEQVALPLDISATAFQQRVWEALQKIPYGQTRSYAQIAEAVGSPRAVRAVANACASNPVALAIPCHR VVQKSGALAGYRWGAARKAALLAAEARHAAGSPAEPSLDDAA >Mature_362_residues MQSPRYSTDAARWAALVARDAEADGAFFYAVKTTGVFCRPSCASRMPRRENVAFFETPAAAREAGFRPCKRCQPEREPRE IEIVRRACAVLDASDRATLAELSAAVHVSPFHLQRLFKRVVGVTPRQYQAARRGAALRDALQGGAAVTRAAVDAGYQSAS RVYEAVPRELGMAPSDFRRKGAGLRIAYATAPTPLGYVLVGATERGICQIAFGDAIAPLVDALAAAFENAECVAAPERLA PFLAQIDAYLRGASEQVALPLDISATAFQQRVWEALQKIPYGQTRSYAQIAEAVGSPRAVRAVANACASNPVALAIPCHR VVQKSGALAGYRWGAARKAALLAAEARHAAGSPAEPSLDDAA
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=172, Percent_Identity=34.8837209302326, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI1788542, Length=351, Percent_Identity=45.8689458689459, Blast_Score=315, Evalue=4e-87, Organism=Escherichia coli, GI1787596, Length=89, Percent_Identity=44.9438202247191, Blast_Score=88, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115533070, Length=81, Percent_Identity=58.0246913580247, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115533068, Length=81, Percent_Identity=58.0246913580247, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320001, Length=93, Percent_Identity=38.7096774193548, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI17137554, Length=88, Percent_Identity=53.4090909090909, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 38536; Mature: 38536
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPRYSTDAARWAALVARDAEADGAFFYAVKTTGVFCRPSCASRMPRRENVAFFETPAA CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCHHHHHCCCCCCCEEEECCHH AREAGFRPCKRCQPEREPREIEIVRRACAVLDASDRATLAELSAAVHVSPFHLQRLFKRV HHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH VGVTPRQYQAARRGAALRDALQGGAAVTRAAVDAGYQSASRVYEAVPRELGMAPSDFRRK HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHC GAGLRIAYATAPTPLGYVLVGATERGICQIAFGDAIAPLVDALAAAFENAECVAAPERLA CCCEEEEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHH PFLAQIDAYLRGASEQVALPLDISATAFQQRVWEALQKIPYGQTRSYAQIAEAVGSPRAV HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH RAVANACASNPVALAIPCHRVVQKSGALAGYRWGAARKAALLAAEARHAAGSPAEPSLDD HHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC AA CC >Mature Secondary Structure MQSPRYSTDAARWAALVARDAEADGAFFYAVKTTGVFCRPSCASRMPRRENVAFFETPAA CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCHHHHHCCCCCCCEEEECCHH AREAGFRPCKRCQPEREPREIEIVRRACAVLDASDRATLAELSAAVHVSPFHLQRLFKRV HHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH VGVTPRQYQAARRGAALRDALQGGAAVTRAAVDAGYQSASRVYEAVPRELGMAPSDFRRK HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHC GAGLRIAYATAPTPLGYVLVGATERGICQIAFGDAIAPLVDALAAAFENAECVAAPERLA CCCEEEEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHH PFLAQIDAYLRGASEQVALPLDISATAFQQRVWEALQKIPYGQTRSYAQIAEAVGSPRAV HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH RAVANACASNPVALAIPCHRVVQKSGALAGYRWGAARKAALLAAEARHAAGSPAEPSLDD HHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]